PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026414700.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

GeBP

Protein Properties

Length: 381aa MW: 43090.6 Da PI: 4.6894

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026414700.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	103.6	1.6e-32	147	241	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiW 96 + r+w+ee eivlL+G+id+ +k+gk+p +d ++fyef+k+si+++v+k+ql++Kir+ K +++++++k ksg+ +f+k+h +k++elsk+iW XP_026414700.1 147 KTARVWTEEGEIVLLKGMIDY-MKQGKNPNSDSNGFYEFIKGSINVDVTKEQLSSKIRHAKGRYRQNEAKEKSGEVLTFTKSHFEKCYELSKSIW 240 678****************.899******************************************************************** PP DUF573 97 g 97 g XP_026414700.1 241 G 241 8 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence
MTLKNHFPLP ENPPSVSSSS ASEDEREVEE EVVNDKEEES DDIEEEEEEE EEDGDDDEET 60 EKSRFCVVPN SKPKSKDAVE EEEENSDDDS ESDEQIPIEK EEAVKKPEHT SIPVKRPVAK 120 RQVEAEKSSK RRKKNNDSNA GEESEKKTAR VWTEEGEIVL LKGMIDYMKQ GKNPNSDSNG 180 FYEFIKGSIN VDVTKEQLSS KIRHAKGRYR QNEAKEKSGE VLTFTKSHFE KCYELSKSIW 240 GAENKPENDG KEKKGKETIE VDGATNGKSK KKKASTDASV SEKREEGVKV GDVDGKLKAT 300 VEKEDVEVCG LIELAQHMAP PGLKSFLNKR AFQLVEPSKR KAFEKRWKDV QVAEGELFLR 360 RIDLVREFSS KALEALKSQT S

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence

MTLKNHFPLP ENPPSVSSSS ASEDEREVEE EVVNDKEEES DDIEEEEEEE EEDGDDDEET  60
EKSRFCVVPN SKPKSKDAVE EEEENSDDDS ESDEQIPIEK EEAVKKPEHT SIPVKRPVAK  120
RQVEAEKSSK RRKKNNDSNA GEESEKKTAR VWTEEGEIVL LKGMIDYMKQ GKNPNSDSNG  180
FYEFIKGSIN VDVTKEQLSS KIRHAKGRYR QNEAKEKSGE VLTFTKSHFE KCYELSKSIW  240
GAENKPENDG KEKKGKETIE VDGATNGKSK KKKASTDASV SEKREEGVKV GDVDGKLKAT  300
VEKEDVEVCG LIELAQHMAP PGLKSFLNKR AFQLVEPSKR KAFEKRWKDV QVAEGELFLR  360
RIDLVREFSS KALEALKSQT S

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	270	298	KKKKASTDASVSEKREEGVKVGDVDGKLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00390.1	1e-22	GeBP family protein