PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026414761.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family M-type_MADS
Protein Properties Length: 215aa    MW: 23607.6 Da    PI: 8.6504
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026414761.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF49.26.6e-161862145
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                    kr e +  rq tf kR++gi+KKA  L +LC+ae av++f+++g 
  XP_026414761.1 18 KRMEKEASRQATFMKRKEGIFKKACQLNTLCAAETAVVLFAPSGA 62
                    6889999***********************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MDAPKAKKTQ GRRKLELKRM EKEASRQATF MKRKEGIFKK ACQLNTLCAA ETAVVLFAPS  60
GAPFSFGEPS VESVVDRYLA GERSLPKDAL IKAEPDARNA DVDTQYNTSV KRQEDAQARG  120
RELAEAKKAD IDLFGWDVPD KEMNLEQLER LKFKLENLQI VDEPGDGLYL ISSTAASSSA  180
NPLVLSKGGS SSNVSNPPPS NDPRGYQFGH GRVGY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24840.18e-34M-type_MADS family protein