PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026414815.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family NF-YB
Protein Properties Length: 220aa    MW: 24701.5 Da    PI: 4.0525
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026414815.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB48.52e-1510101693
           NF-YB   6 rflPianvsrimkkvlPana....kiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrel 93 
                     ++lP a v r++k+ l +      +i k+a     e +  fi ++++ a+d c++ kr+tin++d++ al ++ f++++eplk+ l  ++  
  XP_026414815.1  10 EELPKAIVRRLVKEKLSESDagdlQIHKEAILAFGESARIFIHYLSATANDVCKESKRQTINAEDIFKALEEIEFQEFIEPLKASLDDFKRK 101
                     689***********997642233389***********************************************************9999765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MAKVGAESVE ELPKAIVRRL VKEKLSESDA GDLQIHKEAI LAFGESARIF IHYLSATAND  60
VCKESKRQTI NAEDIFKALE EIEFQEFIEP LKASLDDFKR KNAGKKAGAA KAKEADKKRK  120
MAQSEVEKEP STAKAKEIGA DKKRKKVQPE VEEEPSAHNE DQEDDEEADE EGNEKEDEEE  180
ADEDEQEEEA DEDGDDQEEG DINDKEDEEE ADEEDNSESA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
199120KRKNAGKKAGAAKAKEADKKRK
2117145KKRKMAQSEVEKEPSTAKAKEIGADKKRK
3142146KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27470.11e-40NF-YB family protein