PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026414980.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 911aa MW: 101231 Da PI: 6.8601

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026414980.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	58.2	1.5e-18	303	403	1	99
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+kvl+ sd+++ grlvlpk +ae++ ++++e+ ++++d +g+ W +++++ +++s++yvl+ G ++ +L++gD+v+F++++ e++ XP_026414980.1 303 FEKVLSASDAGRIGRLVLPKACAEAYfpRISQPEGLPIRIQDIKGKDWMFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRID-PEGK 395 99************************666667778***********99899999999.*******************987.7888 PP .EEEEE-S CS B3 92 lvvkvfrk 99 l+++++++ XP_026414980.1 396 LLMGFRKT 403 88888765 PP

Sequence ? help Back to Top
Protein Sequence Length: 911 aa Download sequence
MGTNICMNVS CSSSTSIHWK KGWKLRSGGF ADLCDNCGSA YEQLIYCDTF HLKETGWREC 60 TSCRKRLHCG CIVSKSFLEL LDNGGVECIS CVRSAQFSFI PRDEEVNRCR TLSADALGET 120 QQTFLANKVD VINRGNLMFF GLRTDGDGHI NLHQSHKDNT NGSLQHIKGE QVMSPVGDFR 180 TPNFSNLKRP FMGSLVQTSI GMNIGNSFEN PNIALRVPGL LVDGRDQNTL ASSFQQGHNL 240 MKIGSGLNSE ASKDVLPQAR VARPPPVEGR CRPQLLPRYW PKITDQELQQ IAGDTNSTIV 300 PLFEKVLSAS DAGRIGRLVL PKACAEAYFP RISQPEGLPI RIQDIKGKDW MFQFRFWPNN 360 NSRMYVLEGV TPCIQSMQLQ AGDTVTFSRI DPEGKLLMGF RKTSSPVIMQ ENQMSAMSSG 420 ILPYSGAGGN RPIASGYSNR NRSPKGYVDP HLSALSDLNI GNGDISWHKN EDNGGWPGEG 480 LPMQQPLFVQ RSRKIGSKGK RLLMDTEDAL ELKLTWEEAQ DLLRPPPTVK PSIVKIEDHE 540 FEEYEEPPVF GKKTIFTARS SGGQDQWVQC DSCSRWRKLP ADVLLPSKWT CADNTWDPER 600 SSCSIPDELS RKELDNFLRM NMDIKKRRVT ANRRPTLERE PSALDALASV AALGDSAVDP 660 EIPSVATTTR HPRHRPGCSC IVCIQPPSGK GQKHKPTCNC NVCMTVKRRF ETLMMRKKKR 720 QELEGEMAQK KINISIGSNR DAIEEGGSKC RMLPSDGEET RPRSTESKDG RSRNLFNYQT 780 TDTAMVQIDL NCDPDRDQLE LLRRGPPSAL GVSMMTLLQE ASLPLETYLK QNGLTSLAWE 840 NHQGSSSTHG AAAAVPPHEV VGEDNHEGLR PSTPDENDIA LVQEREIEGG DEGRPSVNDE 900 QSQEENNDGI V

Sequence ? help Back to Top

Protein Sequence Length: 911 aa Download sequence

MGTNICMNVS CSSSTSIHWK KGWKLRSGGF ADLCDNCGSA YEQLIYCDTF HLKETGWREC  60
TSCRKRLHCG CIVSKSFLEL LDNGGVECIS CVRSAQFSFI PRDEEVNRCR TLSADALGET  120
QQTFLANKVD VINRGNLMFF GLRTDGDGHI NLHQSHKDNT NGSLQHIKGE QVMSPVGDFR  180
TPNFSNLKRP FMGSLVQTSI GMNIGNSFEN PNIALRVPGL LVDGRDQNTL ASSFQQGHNL  240
MKIGSGLNSE ASKDVLPQAR VARPPPVEGR CRPQLLPRYW PKITDQELQQ IAGDTNSTIV  300
PLFEKVLSAS DAGRIGRLVL PKACAEAYFP RISQPEGLPI RIQDIKGKDW MFQFRFWPNN  360
NSRMYVLEGV TPCIQSMQLQ AGDTVTFSRI DPEGKLLMGF RKTSSPVIMQ ENQMSAMSSG  420
ILPYSGAGGN RPIASGYSNR NRSPKGYVDP HLSALSDLNI GNGDISWHKN EDNGGWPGEG  480
LPMQQPLFVQ RSRKIGSKGK RLLMDTEDAL ELKLTWEEAQ DLLRPPPTVK PSIVKIEDHE  540
FEEYEEPPVF GKKTIFTARS SGGQDQWVQC DSCSRWRKLP ADVLLPSKWT CADNTWDPER  600
SSCSIPDELS RKELDNFLRM NMDIKKRRVT ANRRPTLERE PSALDALASV AALGDSAVDP  660
EIPSVATTTR HPRHRPGCSC IVCIQPPSGK GQKHKPTCNC NVCMTVKRRF ETLMMRKKKR  720
QELEGEMAQK KINISIGSNR DAIEEGGSKC RMLPSDGEET RPRSTESKDG RSRNLFNYQT  780
TDTAMVQIDL NCDPDRDQLE LLRRGPPSAL GVSMMTLLQE ASLPLETYLK QNGLTSLAWE  840
NHQGSSSTHG AAAAVPPHEV VGEDNHEGLR PSTPDENDIA LVQEREIEGG DEGRPSVNDE  900
QSQEENNDGI V

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	707	720	KRRFETLMMRKKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	0.0	B3 family protein