PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026415381.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB_related

Protein Properties

Length: 624aa MW: 68579.2 Da PI: 8.6027

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026415381.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.4	1.4e-07	523	572	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 r +++ E e lv+av++lG+g+W+ + + k+Rt ++k++w ++ XP_026415381.1 523 RRPFSVHEVEALVHAVEKLGTGRWRDVKLRAFdnaKHRTYVDLKDKWKTL 572 6799********************9988889************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 624 aa Download sequence
MVFQKRLDYG FNGYQVPRGC RSARGRSSLK RKFEDTQMGA FELLATVAGK LLQEREASPA 60 HSNVSGGIGT TMQATVGKDN VKLEQRDEEK PLKVESCDQG SSEETSLVSK PNQNKCLDEF 120 SHVVSDPASL DKSVNAEDRN EIVPETCIFN DMLELDTKPP ALVSSDSSIG IHPSSGPFPG 180 CRGNVKLVSR DDDDNSSGCT QPSTTPLKSS RTPPRLEDRK IKKVLESKYW EVAPKLEGEL 240 SNTDGYIKPI SHNEKVFYTR QRSLRNTLKR RKLDKRAVST SDGGVSSEVI SNSSKNGKNG 300 NTNSLFSTTH GGSGVSSSSA AGHESSSQSK DAHVKLSIKS FRVPELFIEI PETATVGSLK 360 RSVMEAVAAI IGEGLHVGVL YQGKKIRDDS KTLLQTGICD DDKLDGLGFA LEPNPTNGSH 420 FSPKDPPYLV QSDVPQLLTR YPLSPGIDAG LSDASPDTPL TNLTNCVESD HDSVLSPTDM 480 SIDKTMPDSR ALVPHPSMSV DALAVVPLHR KSRRSDLVQR RIRRPFSVHE VEALVHAVEK 540 LGTGRWRDVK LRAFDNAKHR TYVDLKDKWK TLVHTARISP QQRRGEPVPQ ELLDRVLAAH 600 AYWSQQQAKQ QVKQLTETCL LLKT

Sequence ? help Back to Top

Protein Sequence Length: 624 aa Download sequence

MVFQKRLDYG FNGYQVPRGC RSARGRSSLK RKFEDTQMGA FELLATVAGK LLQEREASPA  60
HSNVSGGIGT TMQATVGKDN VKLEQRDEEK PLKVESCDQG SSEETSLVSK PNQNKCLDEF  120
SHVVSDPASL DKSVNAEDRN EIVPETCIFN DMLELDTKPP ALVSSDSSIG IHPSSGPFPG  180
CRGNVKLVSR DDDDNSSGCT QPSTTPLKSS RTPPRLEDRK IKKVLESKYW EVAPKLEGEL  240
SNTDGYIKPI SHNEKVFYTR QRSLRNTLKR RKLDKRAVST SDGGVSSEVI SNSSKNGKNG  300
NTNSLFSTTH GGSGVSSSSA AGHESSSQSK DAHVKLSIKS FRVPELFIEI PETATVGSLK  360
RSVMEAVAAI IGEGLHVGVL YQGKKIRDDS KTLLQTGICD DDKLDGLGFA LEPNPTNGSH  420
FSPKDPPYLV QSDVPQLLTR YPLSPGIDAG LSDASPDTPL TNLTNCVESD HDSVLSPTDM  480
SIDKTMPDSR ALVPHPSMSV DALAVVPLHR KSRRSDLVQR RIRRPFSVHE VEALVHAVEK  540
LGTGRWRDVK LRAFDNAKHR TYVDLKDKWK TLVHTARISP QQRRGEPVPQ ELLDRVLAAH  600
AYWSQQQAKQ QVKQLTETCL LLKT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	215	224	RLEDRKIKKV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07540.1	1e-104	MYB_related family protein