PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026415532.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GRAS
Protein Properties Length: 476aa    MW: 53401.2 Da    PI: 6.1529
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026415532.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS469.91.4e-143494711374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++l+l cA++v++g+le+a+  L+++s+laspdgd+mqR+aayfteALa r+++ +++l kal++++ s  + se + a+klf+e++P++k+s+
  XP_026415532.1  49 LIHLILYCANHVAAGSLENANIGLEQISHLASPDGDTMQRIAAYFTEALADRILKAWPGLHKALNSTRLS--SISEGILARKLFFELFPFVKLSF 141
                     689*************************************************************999988..59********************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     +++NqaIlea+ege++vHiiD+++ +++QW+aLlqaL++Rp+gpp+lRiTg+++    +ke l +t+ rL++ Ae+l++pf+fn+ +  +le+l+
  XP_026415532.1 142 VITNQAILEAMEGEKMVHIIDMNAAEPAQWIALLQALSARPDGPPHLRITGIHE----QKEVLDQTALRLTEEAEKLDIPFQFNP-IICKLENLD 231
                     ******************************************************....9**************************.5778***** PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrll........................................................desvsleserdevLk 229
                     +e+Lrvk+gEala+++vlqlh+ll                                                          s+s++ + +++L 
  XP_026415532.1 232 VERLRVKTGEALAISSVLQLHSLLasddenarkksppasrssnsvnlqralqmnqgtlgellekdmvngyspspdsasssPASLSTSPKMESLLA 326
                     ****************************************************************************9977444444447888*** PP

            GRAS 230 lvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGF 324
                     ++++lsPk++vv+eqe++hn+++F+er+leal++y++lfd+le++++r+s erikvE++l+g+ei+n++aceg+er+erhe+l+kW +r++ aGF
  XP_026415532.1 327 ALWGLSPKIMVVTEQESNHNGSTFMERLLEALYFYASLFDCLESTISRNSMERIKVEKMLFGEEIKNIIACEGTERKERHEKLAKWMQRFDFAGF 421
                     *********************************************************************************************** PP

            GRAS 325 kpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     + vp+s++   qak+ll++++ dgy+++ee+g+lvl+W+dr+L+svSaWr
  XP_026415532.1 422 GRVPMSYYGHLQAKRLLQNYGCDGYNIKEENGCLVLCWQDRSLFSVSAWR 471
                     *************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 476 aa     Download sequence    
MARMVQDEGS SSVTSSPLQF FSLMSLSPSL GSPYPWLREL KSEERGLYLI HLILYCANHV  60
AAGSLENANI GLEQISHLAS PDGDTMQRIA AYFTEALADR ILKAWPGLHK ALNSTRLSSI  120
SEGILARKLF FELFPFVKLS FVITNQAILE AMEGEKMVHI IDMNAAEPAQ WIALLQALSA  180
RPDGPPHLRI TGIHEQKEVL DQTALRLTEE AEKLDIPFQF NPIICKLENL DVERLRVKTG  240
EALAISSVLQ LHSLLASDDE NARKKSPPAS RSSNSVNLQR ALQMNQGTLG ELLEKDMVNG  300
YSPSPDSASS SPASLSTSPK MESLLAALWG LSPKIMVVTE QESNHNGSTF MERLLEALYF  360
YASLFDCLES TISRNSMERI KVEKMLFGEE IKNIIACEGT ERKERHEKLA KWMQRFDFAG  420
FGRVPMSYYG HLQAKRLLQN YGCDGYNIKE ENGCLVLCWQ DRSLFSVSAW RCRRYD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.10.0GRAS family protein