PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026415906.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 122aa    MW: 13771.9 Da    PI: 9.2296
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026415906.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B351.81.5e-1628117198
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     f+k ++ps v+   +l lp kf+++h   ++ + t+tl d +g ++   +i +k +    l++GW+ F   ++L  gD +vFkl+g + f  +v 
  XP_026415906.1  28 FVKPMVPSQVSGGFWLGLPHKFCKDHL--PHHDATITLVDFQGVEYHTIYISTKEG----LSGGWRAFSLGHNLIHGDACVFKLTGPTVF--RVY 114
                     89**********************994..345679***************666666....9***********************997777..888 PP

                     EE- CS
              B3  96 vfr 98 
                     +f+
  XP_026415906.1 115 IFK 117
                     886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 122 aa     Download sequence    
MATIEERRIA IQRAQQFQLS LRGAFPSFVK PMVPSQVSGG FWLGLPHKFC KDHLPHHDAT  60
ITLVDFQGVE YHTIYISTKE GLSGGWRAFS LGHNLIHGDA CVFKLTGPTV FRVYIFKAIR  120
DD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42700.12e-39B3 family protein