PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026415940.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

WOX

Protein Properties

Length: 239aa MW: 27385.4 Da PI: 9.4027

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026415940.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.8	4.5e-19	5	64	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eq++ Le +++ ++p a+e+++L++kl +++ ++V++WFqN++a++k+ XP_026415940.1 5 SRWNPTQEQIDMLEGFYKAgIKTPRAQEIQHLTSKLrvygDIEAKNVFYWFQNHKARQKQ 64 7***************99************************************97 PP
2	Wus_type_Homeobox	101.4	6.4e-33	4	66	3	65
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++RW+Pt+eQi +Le yk+G++tP ++eiq++t++L+ yG ie kNVfyWFQN+kaR++q+q XP_026415940.1 4 NSRWNPTQEQIDMLEGFYKAGIKTPRAQEIQHLTSKLRVYGDIEAKNVFYWFQNHKARQKQRQ 66 79***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 239 aa Download sequence
MCSNSRWNPT QEQIDMLEGF YKAGIKTPRA QEIQHLTSKL RVYGDIEAKN VFYWFQNHKA 60 RQKQRQVRHS YGHDPRIHKK FLYNPMSSRK DSDPCPFPYT NSNGPSTWPP PSYAHRRQNL 120 KLPLPPRSAI IGRSSTNIAN PNIQPADNHA HGIEYVNYKE KQALACTSSS ISSVETLPLF 180 PIHPTGILKS NNEEKYDSSS STKFSLCSAS SSTYHQEEYD PNEAQSRSSQ QFFDFFATH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G59340.1	1e-28	WOX family protein