PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026415997.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

C2H2

Protein Properties

Length: 217aa MW: 23912.2 Da PI: 10.2642

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026415997.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.7	0.0008	53	75	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC+ C++ F++ L H +H XP_026415997.1 53 YKCKTCNRKFPSFQALGGHRASH 75 9***********99999998887 PP
2	zf-C2H2	11.1	0.0013	101	123	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F L H+r+H XP_026415997.1 101 HECSICGLKFAVGQALGGHMRKH 123 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 217 aa Download sequence
MTGNKRGREE TEDISIASMA KFLMLLSSGR GEFDHHPVVQ TQATSISSRS RVYKCKTCNR 60 KFPSFQALGG HRASHKKPRL VNQISSDSPG GKQQMTKPKT HECSICGLKF AVGQALGGHM 120 RKHRAILIEI SSTKEAAAAT TTELSSSSSD ITNNTTHKEQ LLLPEVKKSN NRILSLNLDL 180 NLSAFPTTTM DSNDFEFSTL VEPRKQTSVP PMVYSFI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28710.1	8e-30	C2H2 family protein