PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026415999.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

C2H2

Protein Properties

Length: 216aa MW: 24005.3 Da PI: 9.5682

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026415999.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.1	0.0012	35	57	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C++ F++ L H +H XP_026415999.1 35 YECKTCNRQFPSFQALGGHRASH 57 99**********99999998887 PP
2	zf-C2H2	12.3	0.00053	86	108	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg Fs L H+r+H XP_026415999.1 86 HECSICGLEFSVGQALGGHMRKH 108 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 216 aa Download sequence
MAKFLMLLSS GREEADYQSM VEPLTTSTIN QNRFYECKTC NRQFPSFQAL GGHRASHKKP 60 RLEESVLSGT RSINDNQQQK KKPKAHECSI CGLEFSVGQA LGGHMRKHRA VTAPVATPTE 120 TMGLSSSSSD TTTYKQQPLE LVEISNSRRL LSLNLDLNLT SLPTTAMGSN EFEFSALIEP 180 HKQISVLDTL VGEHRTQMSG RQKQRVAISR AILKDP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G53600.1	4e-28	C2H2 family protein