PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026416248.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family LBD
Protein Properties Length: 219aa    MW: 24163.3 Da    PI: 5.2138
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026416248.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260131.63.3e-41291281100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +CaaCk+lrr+C ++C lapyfp ++p kf  +h++FGasn++k+l++lpe++r da+ss+vyeA+ r+rdPvyG++g+i +l++q++ l+a+la
  XP_026416248.1  29 PCAACKILRRRCGEKCLLAPYFPPTEPLKFTTAHRVFGASNITKMLQELPESQRVDAVSSMVYEANSRMRDPVYGCAGTICQLHKQVSDLQAQLA 123
                     7********************************************************************************************** PP

          DUF260  96 llkee 100
                     + ++e
  XP_026416248.1 124 KSQAE 128
                     99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MGSSTDTSIA TNIPTPSSAP SLPQVVITPC AACKILRRRC GEKCLLAPYF PPTEPLKFTT  60
AHRVFGASNI TKMLQELPES QRVDAVSSMV YEANSRMRDP VYGCAGTICQ LHKQVSDLQA  120
QLAKSQAEIV NMRCQQAHFV GLLCMEMKQH SQYQQQQQQQ PTTSTISPTS SLSSLQLQED  180
IDDYMVNNTI SNQSSSPDNN FDGLIFGDAN LGSEWEPLW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07900.14e-64LBD family protein