PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026416249.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

LBD

Protein Properties

Length: 108aa MW: 12148.3 Da PI: 4.5014

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026416249.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	29.1	2.7e-09	1	49	45	93
DUF260 45 llkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkae 93 ++++lpe++r da+ss+vyeA+ r+rdP + +i++++ + +q ++ XP_026416249.1 1 MVQELPESQRVDAVSSMVYEANSRIRDPDIDDFMMINAITTRHQQQQQP 49 7899*****************************9999999998888765 PP

Sequence ? help Back to Top
Protein Sequence Length: 108 aa Download sequence
MVQELPESQR VDAVSSMVYE ANSRIRDPDI DDFMMINAIT TRHQQQQQPT TNTIFPTSSS 60 LSSLQQDIDD IMSNKIITQS SSPDNNFHGS IFGHANMGLE WNHPCGHN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07900.1	8e-10	LBD family protein