PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026416340.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 239aa    MW: 27522.2 Da    PI: 8.9576
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026416340.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B338.22.5e-12991897
                    -HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
              B3  8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97
                     +  + +rl lpk+f+ ++g+k      ++++ ++g +W++ +  rk  g +++++GW eF +   +++g +++F++dg+s+f   v++f
  XP_026416340.1  9 TSIITDKRLELPKEFTVKYGKK--LCDNVIIKVPNG-VWRIGM--RKAEGLILFENGWPEFMEFYSIRVGHVILFRYDGNSKF--QVHIF 91
                    55567789***********865..444677777666.8*****..999999****************************9999..88877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    
MHFFEIFHTS IITDKRLELP KEFTVKYGKK LCDNVIIKVP NGVWRIGMRK AEGLILFENG  60
WPEFMEFYSI RVGHVILFRY DGNSKFQVHI FGMDATEIDY PSHNDSTNHD AEMTSTHSDE  120
VEVVSIHSDT TQSDDEPSMS SESPLNPKAE PAKQEFPQKS RKQRKAIPTT FRNKALQATV  180
EAVEGFKSEN PFFKVTIHVS YIKGPLRVPN VFANSSLRNI TQRGITLRIS DGRTWKNWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.11e-28B3 family protein