PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026416341.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 611aa    MW: 70619 Da    PI: 9.2356
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026416341.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B362.56.7e-20224322299
                     EEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
              B3   2 fkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                     fk+++++++ k+g++++p +fa+++ g++  + +t tl  ++gr Wev +       + + +l+kGW +Fv + +L egD +vF+l++r++ +++
  XP_026416341.1 224 FKIMLQASHIKKGCMRVPVTFANSYfGNI--TRITTTLSISDGRIWEVGYLSrtITEKTEKTLSKGWPKFVADDHLMEGDACVFELVDRKNIKMN 316
                     69999********************6555..44688888899********665433333478********************************* PP

                     EEEE-S CS
              B3  94 vkvfrk 99 
                     v++fr+
  XP_026416341.1 317 VHIFRQ 322
                     ****96 PP
2B365.48.6e-21378474199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     ffk+ +++++ + ++ ++p +f+ ++  +  +++ +t++ ++gr+Wev + ++   gr +l++GW++F+ +n+LkegD++vF+l++r++ e  v+
  XP_026416341.1 378 FFKIVMQASYIEGQWARVPADFVISYFTNI-TQMVITFRVLDGRTWEVGYVFKAPTGR-WLSQGWRKFAVDNDLKEGDVCVFELVDRNKIEIIVR 470
                     99************************5553.5689***************77555555.7999**********************99******** PP

                     EE-S CS
              B3  96 vfrk 99 
                     +fr+
  XP_026416341.1 471 IFRQ 474
                     **97 PP
3B364.31.9e-20509606199
                     EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..E CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelv 93 
                     ffk+ +++ + k g +++p +fa++h  ++++  + +tl+ ++g++W+v++  r  + r  ++ GW++Fv +n+L+egD++vF+l++  ++ +++
  XP_026416341.1 509 FFKIVMRAGHIKGG-MTVPADFATSHlTNIPR--IVITLRVSDGKTWDVRYVSRPPKVRGRISPGWRKFVADNDLREGDVCVFELVDFrEKIKMN 600
                     88999999999988.***********755544..5899*************99888888889**********************99555****** PP

                     EEEE-S CS
              B3  94 vkvfrk 99 
                     v++fr 
  XP_026416341.1 601 VHIFRP 606
                     ***995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 611 aa     Download sequence    
MQQHVSLHFH NNMKKLNEMP HTCISWFAAL FLFYLTLEIS HSSILTRLPK EFTVKYEKEL  60
SDHAIIKVPN GIWHIGLRNA EGVILFENGW PEFMEFYSIC VGRVILFRYD GNSELQVHIF  120
GIDASEIDYP SHTNNTNHEI EMTSTHTDED EVKVASTHSG STQSNDEPSM SSESFLNQKE  180
YPGGHVLPKK PRKQKRVIPK RFHTKEFKAT LEAAEAFHSE NPSFKIMLQA SHIKKGCMRV  240
PVTFANSYFG NITRITTTLS ISDGRIWEVG YLSRTITEKT EKTLSKGWPK FVADDHLMEG  300
DACVFELVDR KNIKMNVHIF RQHKTFSKLT PKIRHYTAKF QATLEAAEEF TSEKIMHYTA  360
KFQATLEAAE EFTSENPFFK IVMQASYIEG QWARVPADFV ISYFTNITQM VITFRVLDGR  420
TWEVGYVFKA PTGRWLSQGW RKFAVDNDLK EGDVCVFELV DRNKIEIIVR IFRQQEPFSK  480
KITPKSSYYT VEFRATLKAA EEFRSQNPFF KIVMRAGHIK GGMTVPADFA TSHLTNIPRI  540
VITLRVSDGK TWDVRYVSRP PKVRGRISPG WRKFVADNDL REGDVCVFEL VDFREKIKMN  600
VHIFRPVQGM V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.11e-33B3 family protein