PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026416342.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 425aa    MW: 49147.6 Da    PI: 7.2698
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026416342.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B334.73e-11991897
                    -HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
              B3  8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97
                     +v + +rl lpk+f+ ++g+k   s   +++ ++g  W + l  rk  g + +++GW eF +   +++g ++ F++dg+sef   +++f
  XP_026416342.1  9 TSVIRDKRLELPKEFTVKYGKK--LSDNAIIKVPHG-IWHIGL--RKDEGVISFENGWPEFMEFYSICVGHVMFFRYDGNSEF--QLHIF 91
                    6889999************966..777888888887.7*****..***********************************999..55555 PP
2B369.83.6e-22196290198
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     f k ++++++ k + +++p++fa+++  +k++ +++tl  ++gr+Wev++   +++ +  l++GW +Fv +n+LkegD++vF+l++r++ +++v+
  XP_026416342.1 196 FYKLTMQASYIKAN-VRVPNDFADSYLRNKTQ-TKITLGIPDGRTWEVEYVL-RTPTERRLSRGWYRFVADNHLKEGDVCVFELVDREKIQMNVH 287
                     66778888888887.999********666655.69***************65.55555579*************************9******** PP

                     EE- CS
              B3  96 vfr 98 
                     +fr
  XP_026416342.1 288 IFR 290
                     *98 PP
3B372.74.7e-23323419198
                     EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..E CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelv 93 
                     ffkv ++  + + g++++p  fa++h  ++  +++++tl+ ++gr+Wev +  ++++    +++GW eFv +n+LkegD++vF+l++r ++fe++
  XP_026416342.1 323 FFKVVMHTAYINGGMVTVPAVFATSHlTNI--KQMMITLRVSDGRTWEVVYV-SQTPTNGRISQGWAEFVADNDLKEGDVCVFELVDRrKNFEMN 414
                     99************************6433..679****************5.4444444599*********************99888****** PP

                     EEEE- CS
              B3  94 vkvfr 98 
                     v +fr
  XP_026416342.1 415 VYIFR 419
                     ***98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 425 aa     Download sequence    
MHFYEICHTS VIRDKRLELP KEFTVKYGKK LSDNAIIKVP HGIWHIGLRK DEGVISFENG  60
WPEFMEFYSI CVGHVMFFRY DGNSEFQLHI FGKDATEIDY PCHNNDNANH KDEMTSTHSD  120
DDEVEVVSIH SGSTQSNYEP SMTSESSLNQ NAKPAGHKFP QESRKQRTVV PTRLFHSKAF  180
QATLKAADEF RSENPFYKLT MQASYIKANV RVPNDFADSY LRNKTQTKIT LGIPDGRTWE  240
VEYVLRTPTE RRLSRGWYRF VADNHLKEGD VCVFELVDRE KIQMNVHIFR LQKRFVTPEM  300
KNYAAGFQAT LEAAKGFTSE NPFFKVVMHT AYINGGMVTV PAVFATSHLT NIKQMMITLR  360
VSDGRTWEVV YVSQTPTNGR ISQGWAEFVA DNDLKEGDVC VFELVDRRKN FEMNVYIFRL  420
KYSID
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.13e-36B3 family protein