PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026416726.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

HD-ZIP

Protein Properties

Length: 357aa MW: 39547.4 Da PI: 5.3613

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026416726.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	56	6.9e-18	187	241	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++keq Lee F+++++++ +++ LAk+l+L rqV vWFqNrRa+ k XP_026416726.1 187 RKKLRLSKEQSAFLEESFKEHNTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTK 241 788899***********************************************98 PP
2	HD-ZIP_I/II	129.2	1.6e-41	187	277	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 +kk+rlskeq+++LEesF+e+++L+p++Kv+la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+k+ +eLr +lk XP_026416726.1 187 RKKLRLSKEQSAFLEESFKEHNTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKDIQELR-ALK 277 69*************************************************************************************9.555 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MELGLSLGDT SRPFGCSTDK NRSKMMKNNK GLGFCMALGV GYNGRDEEEE EEEGDDEKSS 60 DEQRTDNDNN DSGRNVSSAD PVQLNLLPLV PFTRNQTGFP WSSENGNSDA GSRGFDVNRI 120 PASAEELDDG AAISSPNSTI SSFQIDFSMY RNGGNSKRDS EIAGLNDGDN ERTSSRASDE 180 EENGLARKKL RLSKEQSAFL EESFKEHNTL NPKQKVALAK QLNLRPRQVE VWFQNRRART 240 KLKQTEVDCE YLKRCCETLT EENRRLQKDI QELRALKTSN PYYMQLPATT LTMCPSCERV 300 ATTTTNSGST AAATAPPTTT TTAPTTATTN IQNSNPFSHK KPRFYPFSQP HHASAAS

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MELGLSLGDT SRPFGCSTDK NRSKMMKNNK GLGFCMALGV GYNGRDEEEE EEEGDDEKSS  60
DEQRTDNDNN DSGRNVSSAD PVQLNLLPLV PFTRNQTGFP WSSENGNSDA GSRGFDVNRI  120
PASAEELDDG AAISSPNSTI SSFQIDFSMY RNGGNSKRDS EIAGLNDGDN ERTSSRASDE  180
EENGLARKKL RLSKEQSAFL EESFKEHNTL NPKQKVALAK QLNLRPRQVE VWFQNRRART  240
KLKQTEVDCE YLKRCCETLT EENRRLQKDI QELRALKTSN PYYMQLPATT LTMCPSCERV  300
ATTTTNSGST AAATAPPTTT TTAPTTATTN IQNSNPFSHK KPRFYPFSQP HHASAAS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	236	244	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06710.1	2e-93	HD-ZIP family protein