PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026416727.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

HD-ZIP

Protein Properties

Length: 354aa MW: 39289.2 Da PI: 5.3613

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026416727.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	56	6.8e-18	184	238	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++keq Lee F+++++++ +++ LAk+l+L rqV vWFqNrRa+ k XP_026416727.1 184 RKKLRLSKEQSAFLEESFKEHNTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTK 238 788899***********************************************98 PP
2	HD-ZIP_I/II	129.3	1.6e-41	184	274	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 +kk+rlskeq+++LEesF+e+++L+p++Kv+la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+k+ +eLr +lk XP_026416727.1 184 RKKLRLSKEQSAFLEESFKEHNTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKDIQELR-ALK 274 69*************************************************************************************9.555 PP

Sequence ? help Back to Top
Protein Sequence Length: 354 aa Download sequence
MELGLSLGDT SRPFGCSTDK NRSKMMKNNK GLGFCMALGV GYNGRDEEEE EEEGDDEKSS 60 DEQRTDNDNN DSGRNVSSAD PVQLNLLPLV PFTRNQTGFP WSSENDAGSR GFDVNRIPAS 120 AEELDDGAAI SSPNSTISSF QIDFSMYRNG GNSKRDSEIA GLNDGDNERT SSRASDEEEN 180 GLARKKLRLS KEQSAFLEES FKEHNTLNPK QKVALAKQLN LRPRQVEVWF QNRRARTKLK 240 QTEVDCEYLK RCCETLTEEN RRLQKDIQEL RALKTSNPYY MQLPATTLTM CPSCERVATT 300 TTNSGSTAAA TAPPTTTTTA PTTATTNIQN SNPFSHKKPR FYPFSQPHHA SAAS

Sequence ? help Back to Top

Protein Sequence Length: 354 aa Download sequence

MELGLSLGDT SRPFGCSTDK NRSKMMKNNK GLGFCMALGV GYNGRDEEEE EEEGDDEKSS  60
DEQRTDNDNN DSGRNVSSAD PVQLNLLPLV PFTRNQTGFP WSSENDAGSR GFDVNRIPAS  120
AEELDDGAAI SSPNSTISSF QIDFSMYRNG GNSKRDSEIA GLNDGDNERT SSRASDEEEN  180
GLARKKLRLS KEQSAFLEES FKEHNTLNPK QKVALAKQLN LRPRQVEVWF QNRRARTKLK  240
QTEVDCEYLK RCCETLTEEN RRLQKDIQEL RALKTSNPYY MQLPATTLTM CPSCERVATT  300
TTNSGSTAAA TAPPTTTTTA PTTATTNIQN SNPFSHKKPR FYPFSQPHHA SAAS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	233	241	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06710.1	2e-94	HD-ZIP family protein