PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026416858.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family M-type_MADS
Protein Properties Length: 179aa    MW: 20376 Da    PI: 4.677
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026416858.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF43.44.3e-14946138
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevavi 38
                    k+ie+  +r v f+kRr+g++KKA  L+ L++a+++++
  XP_026416858.1  9 KKIEDRQKRDVAFTKRRHGLFKKAADLCRLTGADISLL 46
                    68*********************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    
MGKRRIEIKK IEDRQKRDVA FTKRRHGLFK KAADLCRLTG ADISLLNNTI NVKEEKVADD  60
ETTRVADDGF WWNNLNPEEI DSIEKLTAVR NQLLDVKKKV AQRKQELLAA AAKPIDIATS  120
TSTTTTCTVV EKMKEDSFLL EDDLRMLLSD CYDDAQNWLP SIDDSGTLFE GLDDLENWG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36590.17e-12M-type_MADS family protein