PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026416863.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family M-type_MADS
Protein Properties Length: 197aa    MW: 22394.4 Da    PI: 6.0453
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026416863.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF57.22.2e-181059251
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    +ie+  +r+v+f+kRr+g++KKA  L+ L++a+++++++s+ gk y +ss
  XP_026416863.1 10 KIEDRKKRNVSFTKRRQGLFKKAADLCRLTGADISLLVISPGGKPYSFSS 59
                    79********************************************9996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
MGKRRIEIQK IEDRKKRNVS FTKRRQGLFK KAADLCRLTG ADISLLVISP GGKPYSFSSS  60
SSISLDDLNY RLNNTIKNIK EGKVVDDETT RVSDDGFWWN NLNPEEIDSI KKLTAVRNQL  120
LDVKEKVSQR KQELLAAAKA IDIATCTTTC TVVEKMEEDS SLLKDDLGML LSDCYDDAQN  180
WFPSIESLHN FESWLLN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1317KRRIEIQKIEDRKKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36590.17e-16M-type_MADS family protein