PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026417117.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family NF-YA
Protein Properties Length: 213aa    MW: 23468.9 Da    PI: 8.8585
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026417117.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA102.54e-32120176158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +ep+YVNaKQy++Il+RRq+Rak+e+ +kl +ksrkpylheSRh hAlrR Rg+gG+F
  XP_026417117.1 120 EEPVYVNAKQYHAILRRRQSRAKAESANKL-IKSRKPYLHESRHLHALRRVRGCGGQF 176
                     69****************************.*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MTSSGRDQSS QSDDSGADEQ QQQSEIHYQH QPPAPGILHP GVASSSVEYM MPPHYEVGHA  60
VGQAYPYPDP YYRSIFAYGA QPMMHPQMMG PHQAGVPMGA QPATVPLPSD PVALPSDAVE  120
EPVYVNAKQY HAILRRRQSR AKAESANKLI KSRKPYLHES RHLHALRRVR GCGGQFLNAK  180
TDDNQQSEAS QNNKTHSRNS SDKNKNASAE KSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30500.12e-47NF-YA family protein