PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026417394.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family C2H2
Protein Properties Length: 203aa    MW: 22708.8 Da    PI: 9.6014
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026417394.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.62.2e-054163123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    + Cp+C+++F ++  L  H++ H
  XP_026417394.1 41 HICPYCSRTFETSQALGGHQNAH 63
                    68******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MQTNTTCKFS SNNNPTRISS GSSPKTNEKI TTMMQMNDMP HICPYCSRTF ETSQALGGHQ  60
NAHRREREAD RREYLANKRA TSSNRMLTRL AAIHNASGKL LSMTPHASYV RGGNEYVYGS  120
KQLGFQSLTN EVRLLPCERC HKFLYQQVLQ QGTPPPAQPV KPVEYEFIPI KGKNILGVGE  180
KDSNGGEEVD VSSKKCLDLT LKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06650.13e-06C2H2 family protein