PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026417570.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family LBD
Protein Properties Length: 169aa    MW: 18049.4 Da    PI: 8.606
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026417570.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260145.81.2e-45341331100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +CaaCk+lrr+Ca+dCv+apyfpa++p+kfanvhk+FGasnv k+l++lp ++r da+ss+vyeA+ar+rdPvyG+vg i++lqqq++ l+++la
  XP_026417570.1  34 PCAACKLLRRRCAQDCVFAPYFPADEPHKFANVHKVFGASNVNKMLQELPMHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLA 128
                     7********************************************************************************************** PP

          DUF260  96 llkee 100
                      +++e
  XP_026417570.1 129 IAQAE 133
                     99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    
MMKENNINTS NNLNNGGYRK GGGGGGAGAG AASPCAACKL LRRRCAQDCV FAPYFPADEP  60
HKFANVHKVF GASNVNKMLQ ELPMHQRGDA VSSMVYEANA RVRDPVYGCV GAISSLQQQI  120
DVLQTQLAIA QAEVVHMRMR SQTSSSITNL TINSSATNEQ QAASALWSC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G31320.14e-66LBD family protein