PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026417736.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB_related

Protein Properties

Length: 989aa MW: 109782 Da PI: 5.9809

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026417736.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.9	4.9e-08	852	900	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 WT E +l+++v q+G g+W+ I + +Rt+ ++k++w+++l XP_026417736.1 852 VWTLSEVMKLIEGVSQHGVGRWTEIKWLLFpssAHRTAVDLKDKWRNLL 900 6***********************88877**************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 989 aa Download sequence
MLGNWEENGK SWTMIENSSM PASGEVVAGG ITYNNSLVEG DGICDPASED EITEIKDLLA 60 EPESVKISMD ALLYCNNEYL EKCLGTGDVL GPAHQNNHLK SYTGTMQSDI PLYHNGLVNA 120 NGVREEDLHV TGGLSSASNE LILDTKYIAR FPNLEYTCEG LHSVTCSPDL SGRVSDSSEA 180 LDLSAGTMNL VPESTSDQNV LKLTTHELQL AYRGIFCLET AVKDRDWLFS RISLGLQNFI 240 MENGPGFLER ETFSMECEDT HLKCSNDSHG TNSSFESCSP GLSEWVADGA QALDLSAGTV 300 NPVPVSTSDQ NVLILDNLTT HELHLAYRGI FGLETTVKDR KWLLSRISLG LQNFIETENG 360 PAFLEREISF TQREDMHLKC SDDSHGKNSS FENSPGLSER ATDAAEAINL SAATINSVPE 420 STSDQYALLF DNMTIHELHQ AFRSTFGLET TVEDRKWLIS RISLGMQKFI EAEDCSGFLE 480 SRVSSAKHED MHLRCNNDSH GTNSSKSCSS GLSERVTDGA ETLDLSAGTI PVSESTSDQN 540 GHLLDKLTTQ ELQYAFKSTF DLETTVKDRK WLINRILIGL QNFVEMENVS GFSEREISST 600 NHVDVQLRCS NDSLGNDSSF VDTKNVSGFS EREVSSMKHV DMHVRCSDDS LGTDSSFASV 660 VCNWAKPLCS SQTEKVTSLD VYRTSHSKVN DTGFGLMSWR NGGAVKKRKR SRKPTRGFIE 720 ASDLKSRYCI EKLEIRITSS KDKLNELSNQ NLLNGVVDLA SNCKQDTSGD SDSRVTCGRR 780 KAKRFAKKNT SVRVHEHDPA GDNKNDRSCC DPEHSSDLES SHTEWKDDMS ESDDCTTVST 840 RKDPSRRKNH RVWTLSEVMK LIEGVSQHGV GRWTEIKWLL FPSSAHRTAV DLKDKWRNLL 900 KASGAKLKNR RKEYIGKKGS QPIPESALKR VKELAIIHPY PRPFQSKHTS SRTPKLVNTA 960 LRSPSNHTAT SSDTTDCRRG RTTRRKSIT

Sequence ? help Back to Top

Protein Sequence Length: 989 aa Download sequence

MLGNWEENGK SWTMIENSSM PASGEVVAGG ITYNNSLVEG DGICDPASED EITEIKDLLA  60
EPESVKISMD ALLYCNNEYL EKCLGTGDVL GPAHQNNHLK SYTGTMQSDI PLYHNGLVNA  120
NGVREEDLHV TGGLSSASNE LILDTKYIAR FPNLEYTCEG LHSVTCSPDL SGRVSDSSEA  180
LDLSAGTMNL VPESTSDQNV LKLTTHELQL AYRGIFCLET AVKDRDWLFS RISLGLQNFI  240
MENGPGFLER ETFSMECEDT HLKCSNDSHG TNSSFESCSP GLSEWVADGA QALDLSAGTV  300
NPVPVSTSDQ NVLILDNLTT HELHLAYRGI FGLETTVKDR KWLLSRISLG LQNFIETENG  360
PAFLEREISF TQREDMHLKC SDDSHGKNSS FENSPGLSER ATDAAEAINL SAATINSVPE  420
STSDQYALLF DNMTIHELHQ AFRSTFGLET TVEDRKWLIS RISLGMQKFI EAEDCSGFLE  480
SRVSSAKHED MHLRCNNDSH GTNSSKSCSS GLSERVTDGA ETLDLSAGTI PVSESTSDQN  540
GHLLDKLTTQ ELQYAFKSTF DLETTVKDRK WLINRILIGL QNFVEMENVS GFSEREISST  600
NHVDVQLRCS NDSLGNDSSF VDTKNVSGFS EREVSSMKHV DMHVRCSDDS LGTDSSFASV  660
VCNWAKPLCS SQTEKVTSLD VYRTSHSKVN DTGFGLMSWR NGGAVKKRKR SRKPTRGFIE  720
ASDLKSRYCI EKLEIRITSS KDKLNELSNQ NLLNGVVDLA SNCKQDTSGD SDSRVTCGRR  780
KAKRFAKKNT SVRVHEHDPA GDNKNDRSCC DPEHSSDLES SHTEWKDDMS ESDDCTTVST  840
RKDPSRRKNH RVWTLSEVMK LIEGVSQHGV GRWTEIKWLL FPSSAHRTAV DLKDKWRNLL  900
KASGAKLKNR RKEYIGKKGS QPIPESALKR VKELAIIHPY PRPFQSKHTS SRTPKLVNTA  960
LRSPSNHTAT SSDTTDCRRG RTTRRKSIT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	706	711	KKRKRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.1	2e-25	MYB_related family protein