PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026417861.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB_related

Protein Properties

Length: 771aa MW: 85083.9 Da PI: 4.5332

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026417861.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	36	1.6e-11	604	647	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +++W++++ el++++++q+G++ ++ I + ++ gRt+ q+k+++ k XP_026417861.1 604 KQSWSQQDTELFYEGIRQFGTD-FAMIQQLFP-GRTRHQVKLKYKK 647 789*****************.*****.*********87 PP

Sequence ? help Back to Top
Protein Sequence Length: 771 aa Download sequence
MDLDDLLSEP VVVNARAGFK FQPKARPKGK VKGTVLPTPS QFDSSKDKPV AVDDRHADIL 60 KSVAHLVPLA ETVSVNSSAD TPDEIPRNST VIDSSSQPVI QHSVNHTGAL FQEVSVSDGD 120 RIFASANVSP QFGTRGADVA SPDPSFVGVA NFSDIHADKQ AGFTRSGVET ADIFSDLESL 180 DDILPQPAMS NGNTVKKFQP KVKVNSQPTN KLPISRPVAS EADSERLASV ASNPNASIAP 240 EINSNPDIVE VSQEVLNYGD AADALGVSWV GDMRLEREEE AFGGINSQDT ATGNPFLVPC 300 ANESLEEDLT PTFPSDSFID SSTMGFSNSV PRDASPEQLT HELESSAERS YPELVTQEEL 360 VDLQAGHVIS GGENERSVSA ASNKNGTGKS SRLLRNEVSH PVAADEMAEE TRENQHLLSE 420 PAQNSSGNVD NNDDYCRGEE APNSNRTPEN SKKPVSGNEK TGRRRKKADG PDSSDKELPK 480 KKFSHSTRRN RRKVDKILLE TPDHEIDPRK LTLKDLILLA EAKERLLSKD PNAAKNSLPN 540 QRNTRDTSFG EEDSFGLPED SFGLRDDSFG LRDDSSFGYQ DDEQAAPSAQ PKLNYHTFMK 600 RTSKQSWSQQ DTELFYEGIR QFGTDFAMIQ QLFPGRTRHQ VKLKYKKEEK QHPQRLSDAL 660 TNRSKNHSHF ELVIERLKKA AAEAEAEQNS NRDDESVGLT GEEEEVTHDT NEEVTQNKNQ 720 DKFEEEEMGE GTMEAEEVAT VNHQGYNPVK CHQESEEEDV YDIWSEYKSD I

Sequence ? help Back to Top

Protein Sequence Length: 771 aa Download sequence

MDLDDLLSEP VVVNARAGFK FQPKARPKGK VKGTVLPTPS QFDSSKDKPV AVDDRHADIL  60
KSVAHLVPLA ETVSVNSSAD TPDEIPRNST VIDSSSQPVI QHSVNHTGAL FQEVSVSDGD  120
RIFASANVSP QFGTRGADVA SPDPSFVGVA NFSDIHADKQ AGFTRSGVET ADIFSDLESL  180
DDILPQPAMS NGNTVKKFQP KVKVNSQPTN KLPISRPVAS EADSERLASV ASNPNASIAP  240
EINSNPDIVE VSQEVLNYGD AADALGVSWV GDMRLEREEE AFGGINSQDT ATGNPFLVPC  300
ANESLEEDLT PTFPSDSFID SSTMGFSNSV PRDASPEQLT HELESSAERS YPELVTQEEL  360
VDLQAGHVIS GGENERSVSA ASNKNGTGKS SRLLRNEVSH PVAADEMAEE TRENQHLLSE  420
PAQNSSGNVD NNDDYCRGEE APNSNRTPEN SKKPVSGNEK TGRRRKKADG PDSSDKELPK  480
KKFSHSTRRN RRKVDKILLE TPDHEIDPRK LTLKDLILLA EAKERLLSKD PNAAKNSLPN  540
QRNTRDTSFG EEDSFGLPED SFGLRDDSFG LRDDSSFGYQ DDEQAAPSAQ PKLNYHTFMK  600
RTSKQSWSQQ DTELFYEGIR QFGTDFAMIQ QLFPGRTRHQ VKLKYKKEEK QHPQRLSDAL  660
TNRSKNHSHF ELVIERLKKA AAEAEAEQNS NRDDESVGLT GEEEEVTHDT NEEVTQNKNQ  720
DKFEEEEMGE GTMEAEEVAT VNHQGYNPVK CHQESEEEDV YDIWSEYKSD I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39160.1	4e-49	MYB_related family protein