PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026417866.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 564aa MW: 61482.2 Da PI: 4.9939

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026417866.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.1	2e-18	41	88	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT +Ed +lv++v+++G g+W+++ ++ g+ R++k+c++rw ++l XP_026417866.1 41 KGPWTSQEDAILVEYVNKHGEGNWNAVQKHSGLSRCGKSCRLRWANHL 88 79******************************************9986 PP
2	Myb_DNA-binding	48.7	1.8e-15	94	137	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++T++E+ +v++++++G++ W++ a++++ gRt++++k++w++ XP_026417866.1 94 KGAFTADEERMIVELHAKMGNK-WARMAAHLP-GRTDNEIKNYWNT 137 799*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 564 aa Download sequence
MSHSSNDSED GLLSKDQSDS QSIDEGSCGG SFGVGGVILK KGPWTSQEDA ILVEYVNKHG 60 EGNWNAVQKH SGLSRCGKSC RLRWANHLRP NLKKGAFTAD EERMIVELHA KMGNKWARMA 120 AHLPGRTDNE IKNYWNTRIK RRQRAGLPLY PPEVCMQTLN GNYQYQESDE FNNVDMQQQG 180 LLHANNYEIP DVTFDGLKGN QGVLSCEHAL PDMSVVMLPQ GLGSSLSYNF YPTTMHRLKR 240 LRDPENLFPG FNSSLASSVV SPFDPFQSES CEKIHQPPFG LTFPCVPNRN KIKKSSPFGA 300 RSGSHAFSNG NFSTSKPING PVKLELPSFQ YPDTDVGGCW GTSPVLPSLE SVDTFTQSSP 360 LSNGQVQSDC LSSRNSGLLD ALLQEAQTLK NQSSEKSSSS SVVTPSDVMD GSNLDLCETG 420 WEDYGDPISP LGRSAASVFG GCTPISGSST DDPALSEALP VAGSSIKQEP VEHITNPYGG 480 EEGTSPKLDF SRPDALLGAG WFDHPSCAKD NSKADTIAAL LGEDLCNDYK HMNETNTITQ 540 EWETVSKEWD NMPDGCHVIQ TSLR

Sequence ? help Back to Top

Protein Sequence Length: 564 aa Download sequence

MSHSSNDSED GLLSKDQSDS QSIDEGSCGG SFGVGGVILK KGPWTSQEDA ILVEYVNKHG  60
EGNWNAVQKH SGLSRCGKSC RLRWANHLRP NLKKGAFTAD EERMIVELHA KMGNKWARMA  120
AHLPGRTDNE IKNYWNTRIK RRQRAGLPLY PPEVCMQTLN GNYQYQESDE FNNVDMQQQG  180
LLHANNYEIP DVTFDGLKGN QGVLSCEHAL PDMSVVMLPQ GLGSSLSYNF YPTTMHRLKR  240
LRDPENLFPG FNSSLASSVV SPFDPFQSES CEKIHQPPFG LTFPCVPNRN KIKKSSPFGA  300
RSGSHAFSNG NFSTSKPING PVKLELPSFQ YPDTDVGGCW GTSPVLPSLE SVDTFTQSSP  360
LSNGQVQSDC LSSRNSGLLD ALLQEAQTLK NQSSEKSSSS SVVTPSDVMD GSNLDLCETG  420
WEDYGDPISP LGRSAASVFG GCTPISGSST DDPALSEALP VAGSSIKQEP VEHITNPYGG  480
EEGTSPKLDF SRPDALLGAG WFDHPSCAKD NSKADTIAAL LGEDLCNDYK HMNETNTITQ  540
EWETVSKEWD NMPDGCHVIQ TSLR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11440.1	1e-110	MYB family protein