PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026418002.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 334aa MW: 37532.2 Da PI: 7.2294

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026418002.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	46.8	7e-15	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W +eEd++l++ ++++G+g +W + +++ g++R++k+c++rw++yl XP_026418002.1 14 KGPWPPEEDLILKQFIEKHGTGgNWISLPHRAGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	35.5	2.3e-11	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g ++ +Ed ++ + G++ W+ Ia+ ++ gRt++++k++w++ XP_026418002.1 69 GEFSDDEDRIICTLYSSIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 789****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 334 aa Download sequence
MGRAPSCDKA NVKKGPWPPE EDLILKQFIE KHGTGGNWIS LPHRAGLKRC GKSCRLRWLN 60 YLRPNIKHGE FSDDEDRIIC TLYSSIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKLLIS 120 SSTNNSGTSA TMLVPSTFPD HHHHHTNINL FSHHHSPYQV SSPSSTYYDQ KPILMNSSNH 180 LNNNNNTATY SPPNLMSLLS DNQSQHSCSS SDNGSTSNQV GYGTSATTPA FVGSTHEQNL 240 AYDEGFYNFN ITSGVEEDHD EVHKSSSLPT PSGGGVNHSY DPWNERQNGL WSDHQNHQQL 300 EEIKQLVSSN PNHNHNSGWN FFMADAQGKF MMYY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	6e-66	MYB family protein