PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026418034.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 256aa MW: 29295.6 Da PI: 9.6571

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026418034.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.7	1.3e-08	28	73	1	44
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 r +W +d+ + +a++ ++ g +W++Ia++++ g+t+ ++++++ XP_026418034.1 28 RTPWPRSLDKSFEQAIAIFPEGtpdRWRKIAAHVP-GKTPWEIREHY 73 6789999**************************.********9 PP
2	Myb_DNA-binding	41.2	3.9e-13	138	182	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE++l++ + +++G+g+W++I+r Rt+ q+ s+ qky XP_026418034.1 138 PWTEEEHKLFLIGLNRYGKGDWRSISRNAVMSRTPTQVASHAQKY 182 7***************************99**********9 PP

Sequence ? help Back to Top
Protein Sequence Length: 256 aa Download sequence
MFQEDFMMMG SNYLPSATQQ SSQFYSSRTP WPRSLDKSFE QAIAIFPEGT PDRWRKIAAH 60 VPGKTPWEIR EHYEALIHDV TEIDSGRVEL PRYEDDYAGG NNDSFSKTWG SDSGRRSNQI 120 SFASKTKNNT EERKKGIPWT EEEHKLFLIG LNRYGKGDWR SISRNAVMSR TPTQVASHAQ 180 KYYLRLNSMK KEKKRSSIHD ITTVETRTVS PPQSDKSRVG SASDSSMKMG MSIDLPRSFF 240 DQGYSSSGYQ QLGYPM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04760.1	2e-70	MYB family protein