PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026418067.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 345aa MW: 39344.8 Da PI: 6.9522

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026418067.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	105.7	2.4e-33	111	209	1	99
EEEE-..-HHHHTT-EE--HHH.HTT...---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh...ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefe 91 f+k ltpsdv+k++rlv+pk++ae++ gg + l++edesg+ W+++++y+++s++yvltkGW++Fvk+++L++gD+v+F++ +r ++++ XP_026418067.1 111 FEKPLTPSDVGKLNRLVIPKQHAEKYlplGGH---DSLLSFEDESGKDWRFRYSYWNSSQSYVLTKGWSRFVKEKHLDAGDIVMFQR-RRfDGER 201 99***********************98544...237********************************************6.5669999 PP .EEEEE-S CS B3 92 lvvkvfrk 99 l+++++r+ XP_026418067.1 202 LFIRWRRR 209 ****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 345 aa Download sequence
MSRNTQFYTQ LPHEGLYGTQ PIMDHHQGHL IVPDHHNQQQ QLHHWGSSAS NQNQNQVVWY 60 SQEAARTQQS VISDDEEGEE SGGGGGDGGG GGRAGTNEVV EIEEEEREHM FEKPLTPSDV 120 GKLNRLVIPK QHAEKYLPLG GHDSLLSFED ESGKDWRFRY SYWNSSQSYV LTKGWSRFVK 180 EKHLDAGDIV MFQRRRFDGE RLFIRWRRRN SPTPTAGDDH QFCSSRSSLQ VVPNSNTSNC 240 NSNSSSSTTT NSTWNQANFY PNSQQQHYQY HHHQQQQHHH GPSSYPSPPL HQHHNHHVPL 300 LYQSPYLHAV GHNKDEAAVD EKMKIAAGGN SKKFRLFGVN LDLPN

Sequence ? help Back to Top

Protein Sequence Length: 345 aa Download sequence

MSRNTQFYTQ LPHEGLYGTQ PIMDHHQGHL IVPDHHNQQQ QLHHWGSSAS NQNQNQVVWY  60
SQEAARTQQS VISDDEEGEE SGGGGGDGGG GGRAGTNEVV EIEEEEREHM FEKPLTPSDV  120
GKLNRLVIPK QHAEKYLPLG GHDSLLSFED ESGKDWRFRY SYWNSSQSYV LTKGWSRFVK  180
EKHLDAGDIV MFQRRRFDGE RLFIRWRRRN SPTPTAGDDH QFCSSRSSLQ VVPNSNTSNC  240
NSNSSSSTTT NSTWNQANFY PNSQQQHYQY HHHQQQQHHH GPSSYPSPPL HQHHNHHVPL  300
LYQSPYLHAV GHNKDEAAVD EKMKIAAGGN SKKFRLFGVN LDLPN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36080.2	2e-51	B3 family protein