PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026418117.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family NF-YC
Protein Properties Length: 223aa    MW: 25870.2 Da    PI: 4.1875
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026418117.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC35.32.4e-111302082199
           NF-YC  21 lPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprd 99 
                     +P  rik i+k +    +i+ ea  l+ ka e f+ ++t  +  +  + +++++    ++++vt+t+ +dfl d vp++
  XP_026418117.1 130 FPANRIKTIIKNEGFDFRITQEAVFLINKATEQFLEQFTEDARANVIKDRKKAVAYKHVSSVVTKTKRYDFLSDFVPEK 208
                     899*********999999**********************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MKRNPKPKQP IKEPEIQMEA SCSSASEEPM EEEEEQSQSQ SQEEEEQGEE EQVEEEEDGQ  60
EEEEEEEEEE EEEAKSSNNS NENMNEESME DEEEEEQKPE EEVKKIKKKA SSKKIKDTMK  120
PNVVSSACRF PANRIKTIIK NEGFDFRITQ EAVFLINKAT EQFLEQFTED ARANVIKDRK  180
KAVAYKHVSS VVTKTKRYDF LSDFVPEKIK AEDASSERKL AET
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07980.12e-27NF-YC family protein