PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026418145.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family LBD
Protein Properties Length: 219aa    MW: 24085.2 Da    PI: 5.5749
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026418145.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260133.11.1e-41281271100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +CaaCk+lrr+C+++Cvlapyfp ++p kf  +h++FGasn++k+l++lpe++r da+ss+vyeA+ r+rdPvyG++g+i +l++q++ l+a+la
  XP_026418145.1  28 PCAACKILRRRCVEKCVLAPYFPPTEPLKFTTAHRVFGASNIIKMLQELPESQRVDAVSSMVYEANSRIRDPVYGCAGTICQLHKQVSDLQAQLA 122
                     7********************************************************************************************** PP

          DUF260  96 llkee 100
                     + ++e
  XP_026418145.1 123 KSQAE 127
                     99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MGSSTETSIA TTISNSSPPS PPQVIVSPCA ACKILRRRCV EKCVLAPYFP PTEPLKFTTA  60
HRVFGASNII KMLQELPESQ RVDAVSSMVY EANSRIRDPV YGCAGTICQL HKQVSDLQAQ  120
LAKSQAEVVN MRCQQAHLVG LLCMEMKQHS QYQQQQQQQQ QPTTSTISPT SSLSSLQMQH  180
DVDDFLFNTI TTDSSSPDNS FDGLISGDGN LGSEWESLW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07900.13e-62LBD family protein