PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026418175.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family NF-YB
Protein Properties Length: 159aa    MW: 17517.5 Da    PI: 5.357
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026418175.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB165.95.2e-5211107197
           NF-YB   1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 
                     ++eqdr+lPianv+rimk+ lP nak+sk+++et+qecvsefisfvt+ea+d+c++ekrkt+ngdd++wa++tlG++dy+eplk yl+kyreleg
  XP_026418175.1  11 MKEQDRLLPIANVGRIMKQSLPPNAKVSKESRETMQECVSEFISFVTGEAADRCRKEKRKTVNGDDICWAISTLGLDDYAEPLKRYLSKYRELEG 105
                     589******************************************************************************************** PP

           NF-YB  96 ek 97 
                     +k
  XP_026418175.1 106 DK 107
                     97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    
MGSSGSGNDG MKEQDRLLPI ANVGRIMKQS LPPNAKVSKE SRETMQECVS EFISFVTGEA  60
ADRCRKEKRK TVNGDDICWA ISTLGLDDYA EPLKRYLSKY RELEGDKANQ NIGSSSYHAD  120
EDETSAFENG GRPMVPNPLD FNMFGNKGTI NKGSSSRPN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47810.14e-57NF-YB family protein