PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026418279.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family FAR1
Protein Properties Length: 229aa    MW: 27081 Da    PI: 9.4281
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026418279.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR169.67.5e-2217101288
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 
                     +Y++YAk++GFs +k++skk   ng+  + tf+C +egk+++ +++++  +++    +tgCkakl+ ++e d+kw+++ l+leHnH+
  XP_026418279.1  17 CYRRYAKRMGFSCKKRSSKKD--NGQLRHVTFTCIREGKNKRVTDASVVLNHNFYLIKTGCKAKLTARLEPDDKWRISVLVLEHNHQ 101
                     7**************999887..999*******************9999999**********************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MPKIGMEFDT VEEIYECYRR YAKRMGFSCK KRSSKKDNGQ LRHVTFTCIR EGKNKRVTDA  60
SVVLNHNFYL IKTGCKAKLT ARLEPDDKWR ISVLVLEHNH QNIPIEARYW RYNKVINNPV  120
KRKHLWNDKK GTRMHELYHT IAVEDIPEIV SEQSPQGTFS LNRCDIGEAQ FYKFDNDKSH  180
EKFHPGQVWA SYCKLDDMPK YYVEISRVEL FPDLNCTRNG LNHVLHQGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76320.22e-15FAR1 family protein