PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026419025.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

GeBP

Protein Properties

Length: 387aa MW: 43735.2 Da PI: 4.6879

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026419025.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	98.1	8.1e-31	141	235	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiW 96 ++ r+w+ee eivlLqG++d+ k+gk p d ++fyef+++si+++vsk+ql++Kir+ K +++++++k sg+ +fsk+h ++++elsk+iW XP_026419025.1 141 KSARVWTEEGEIVLLQGMVDY-IKKGKCPNTDSNGFYEFIEGSIDSDVSKEQLSSKIRHAKVRYRQNEAKEMSGEVLTFSKSHFENCYELSKMIW 234 689****************.89999****************************************************************** PP DUF573 97 g 97 g XP_026419025.1 235 G 235 8 PP

Sequence ? help Back to Top
Protein Sequence Length: 387 aa Download sequence
MTLKNLPSVS SSSASEEERE VEEEVVNNKK EESDDSEEEE EEEEGGDDDE ETEKSRFYVV 60 PNSKSKSKYA EEEEDSDDDS ESDEQIPIEK EKEVKKPKHT SIPAKRPAVT PAAKPRVQAE 120 KSAKRRKKNN DANGGEESEK KSARVWTEEG EIVLLQGMVD YIKKGKCPNT DSNGFYEFIE 180 GSIDSDVSKE QLSSKIRHAK VRYRQNEAKE MSGEVLTFSK SHFENCYELS KMIWGADRKQ 240 ENDGRKKKGK DGEGETIEVD GATNGKSKSR KKKASNDAGV SEKHEEGVKV DDVADQLKAT 300 VEKEEEEESF GLNELILSKE QIIRPPPGLE SFLNRRAFRL IDPTKGKTLE KKWKDLQVAE 360 TELFLKRIDL VREYSSLALE ALKSPTS

Sequence ? help Back to Top

Protein Sequence Length: 387 aa Download sequence

MTLKNLPSVS SSSASEEERE VEEEVVNNKK EESDDSEEEE EEEEGGDDDE ETEKSRFYVV  60
PNSKSKSKYA EEEEDSDDDS ESDEQIPIEK EKEVKKPKHT SIPAKRPAVT PAAKPRVQAE  120
KSAKRRKKNN DANGGEESEK KSARVWTEEG EIVLLQGMVD YIKKGKCPNT DSNGFYEFIE  180
GSIDSDVSKE QLSSKIRHAK VRYRQNEAKE MSGEVLTFSK SHFENCYELS KMIWGADRKQ  240
ENDGRKKKGK DGEGETIEVD GATNGKSKSR KKKASNDAGV SEKHEEGVKV DDVADQLKAT  300
VEKEEEEESF GLNELILSKE QIIRPPPGLE SFLNRRAFRL IDPTKGKTLE KKWKDLQVAE  360
TELFLKRIDL VREYSSLALE ALKSPTS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	124	166	KRRKKNNDANGGEESEKKSARVWTEEGEIVLLQGMVDYIKKGK
2	125	167	KRRKKNNDANGGEESEKKSARVWTEEGEIVLLQGMVDYIKKGK
3	245	273	RKKKGKDGEGETIEVDGATNGKSKSRKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00390.1	1e-22	GeBP family protein