PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026419107.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

C2H2

Protein Properties

Length: 237aa MW: 27003.8 Da PI: 10.2175

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026419107.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18.5	5.5e-06	94	116	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_026419107.1 94 FVCEICNKGFQRDQNLQLHRRGH 116 89*******************88 PP
2	zf-C2H2	13.4	0.00023	170	192	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H +t+ XP_026419107.1 170 WKCDKCSKKYAVQSDWKAHSKTC 192 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence
MSNISGDSGS FSSGNTTQEA VAQQHLYDQQ QLQDHLTHDG SSNSITTTMV NSNISPPLQL 60 PSVLKKKRSL PGNPDPSAEV IALSPTTLMA TNRFVCEICN KGFQRDQNLQ LHRRGHNLPW 120 KLKQRSTTEI RKRVYICPEP SCVHHNPARA LGDLTGIKKH FRRKHGEKKW KCDKCSKKYA 180 VQSDWKAHSK TCGTREYKRD FRWTAPLIYI LQSFFICLSV KLVVNTNCQS YTYAIRN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G03840.1	5e-79	C2H2 family protein