PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026419146.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 208aa MW: 23903.6 Da PI: 7.1598

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026419146.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.9	1e-17	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd +l+++++ +G g W++ ar g++Rt+k+c++rw++yl XP_026419146.1 15 KGPWTMEEDMILINYIANHGEGVWNSLARSAGLNRTGKSCRLRWLNYL 62 79********************************************97 PP
2	Myb_DNA-binding	54.4	2.8e-17	68	111	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T+eE++l+ ++++++G++ W++Iar+++ gRt++++k++w++ XP_026419146.1 68 RGNITPEEQLLIMELHAKWGNR-WSKIARHLP-GRTDNEIKNFWRT 111 7999****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 208 aa Download sequence
MDKRPCSSQE SEVRKGPWTM EEDMILINYI ANHGEGVWNS LARSAGLNRT GKSCRLRWLN 60 YLRPDVRRGN ITPEEQLLIM ELHAKWGNRW SKIARHLPGR TDNEIKNFWR TKIQKHMKQP 120 GDNSSQNPGQ TSTDLQHCGG ASTSTQTSTT EDGVENYSPI YTADHHLHQH LHHNHLSFPP 180 NTLPPPETNS ENFWGMEDLW SMQLLNGD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27810.1	4e-83	MYB family protein