PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026419244.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

HD-ZIP

Protein Properties

Length: 342aa MW: 38773.7 Da PI: 7.1381

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026419244.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55.7	8.5e-18	99	152	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ eq+++Le+ Fe +++ e++ +LA+ lgL+ rq+ +WFqNrRa++k XP_026419244.1 99 KKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWK 152 456899***********************************************9 PP
2	HD-ZIP_I/II	129.2	1.7e-41	98	188	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 ekkrrl+ eqvk+LE++Fe +kLeperK++lar+Lglqprq+a+WFqnrRAR+ktk lEkdy+ Lkr++da+k++ne+L++++++Lr+e+ XP_026419244.1 98 EKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKSLEKDYDILKRQFDAVKADNEALQSQNKKLRDEI 188 69**************************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence
MGSCNGMAFF PSSFMVQNSS HHDQEDHHHH PTSFNSVLPS SFTSLQPVDF HHGAGVASLP 60 GKKTSSMAFT GFDVCDHHQE NNNNGAEDYS DDGSQMGEKK RRLNMEQVKT LEKNFELGNK 120 LEPERKMQLA RALGLQPRQI AIWFQNRRAR WKTKSLEKDY DILKRQFDAV KADNEALQSQ 180 NKKLRDEILA LKSKEIPTHE YIINLNKETD QQGCSSSSNR SDNSSEINLD LSRRSTTTSS 240 AINSPTTLSS SHRQQMISSR PTTITALFPS SSSSSSRPNQ IQVAQQILHH QNSQQYHQKS 300 ASVDNALVPP QHQEESLINN IFCGIDDQPN FWPWQEQQQF HN

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence

MGSCNGMAFF PSSFMVQNSS HHDQEDHHHH PTSFNSVLPS SFTSLQPVDF HHGAGVASLP  60
GKKTSSMAFT GFDVCDHHQE NNNNGAEDYS DDGSQMGEKK RRLNMEQVKT LEKNFELGNK  120
LEPERKMQLA RALGLQPRQI AIWFQNRRAR WKTKSLEKDY DILKRQFDAV KADNEALQSQ  180
NKKLRDEILA LKSKEIPTHE YIINLNKETD QQGCSSSSNR SDNSSEINLD LSRRSTTTSS  240
AINSPTTLSS SHRQQMISSR PTTITALFPS SSSSSSRPNQ IQVAQQILHH QNSQQYHQKS  300
ASVDNALVPP QHQEESLINN IFCGIDDQPN FWPWQEQQQF HN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69780.1	3e-84	HD-ZIP family protein