PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026419322.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MYB_related
Protein Properties Length: 285aa    MW: 31340.7 Da    PI: 10.0782
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026419322.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding39.21.6e-12555146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46
                     +++WT+eE+e l+ +v+++G+g Wk I +          R+  ++k++w++
   XP_026419322.1  5 KQKWTAEEEEALKAGVNKHGTGKWKNIQKDPEythilAARSNIDLKDKWRN 55
                     79***********************************99**********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MGAPKQKWTA EEEEALKAGV NKHGTGKWKN IQKDPEYTHI LAARSNIDLK DKWRNMSVSA  60
TGEGSRPKGV KAAAAAAAAA ATTPKVPKTQ SAIAIFQSPS SSQTAENPKD KVLVDPAKNT  120
ADGKPPPRYN AMILEALSNI KDPNGADIGV IDDFIERRHE VPSNFRRLLS SKLRRLVAQN  180
KLEKVQNYYK IKKDATFGTR AHPKSKESRA KQSPDCRFPG STVMESSIFT AQKIAEAENK  240
SFVASEAVKE AERVEGMAEH SACMKQFFED ILEQCKRGEP VIMAF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17520.12e-59MYB_related family protein