PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026419324.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family YABBY
Protein Properties Length: 223aa    MW: 25413.7 Da    PI: 6.0872
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026419324.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY205.71.8e-6381644167
           YABBY   4 fssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvss 98 
                      +  e++CyvqC+fCntil+vsvP +sl+kvvtvrCGhCt llsvn++ as + + +  + +s+ +e+++e ++e+++l++  ek++ +      
  XP_026419324.1   8 LELQEKICYVQCGFCNTILLVSVPCSSLSKVVTVRCGHCTCLLSVNMMRASFV-PLQ--FLTSIDDEQKQEVRHEDMELQKAPEKQSPPLLVLCE 99 
                     67889*****************************************9887754.222..234566677777777777777666666555544443 PP

           YABBY  99 eklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkih 167
                        +++e+e++p +p +++PPekrqr+Psaynrfikeeiqr+k   P+++h+eafs+aaknWahfP++ 
  XP_026419324.1 100 ---NDEEEENLP-TPIINKPPEKRQRAPSAYNRFIKEEIQRLKVVEPNMTHKEAFSTAAKNWAHFPRLQ 164
                     ...344445555.6779*************************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MSACNNLLEL QEKICYVQCG FCNTILLVSV PCSSLSKVVT VRCGHCTCLL SVNMMRASFV  60
PLQFLTSIDD EQKQEVRHED MELQKAPEKQ SPPLLVLCEN DEEEENLPTP IINKPPEKRQ  120
RAPSAYNRFI KEEIQRLKVV EPNMTHKEAF STAAKNWAHF PRLQHRENGE SCSAFGRENV  180
TTNSDVYEVD ALHAQDKGFH GRTTIPWSQS AWTENHFGYS NQS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G23420.13e-58YABBY family protein