PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026419742.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family M-type_MADS
Protein Properties Length: 189aa    MW: 21650.3 Da    PI: 4.4356
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026419742.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF741.2e-23957149
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                    k+i++k +r+vtf+kRr+g++KKA EL+ L++a+v++i+fs++gkl+++
  XP_026419742.1  9 KKIDDKKKRSVTFTKRRQGLFKKADELCNLTGADVSLIVFSPSGKLFTF 57
                    68**********************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
MGKKKIEIKK IDDKKKRSVT FTKRRQGLFK KADELCNLTG ADVSLIVFSP SGKLFTFGCP  60
NSDEVLNRFP VQEDDGKMSS TSENGDGFWW NDIKIDELDT QEKVDAVREQ LLQVKNLVAK  120
RKEELLALST PSAEEKETTT GNIEDSCMFS VNEDDHSWFP TLTSDDMNEF DELLKDFYVD  180
QNMQQLPTY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1317KKKIEIKKIDDKKKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36590.11e-19M-type_MADS family protein