PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026419969.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family M-type_MADS
Protein Properties Length: 127aa    MW: 14353.5 Da    PI: 9.9154
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026419969.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF74.77.5e-24957149
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                    krie +  rqvtfskRr g++KKA+ELS+LC+ae+a+i+fs+ gk + +
  XP_026419969.1  9 KRIEKEDARQVTFSKRRGGVFKKAHELSTLCGAEIAIIVFSPAGKPFSF 57
                    79******************************************96665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 127 aa     Download sequence    
MGRQKIEIKR IEKEDARQVT FSKRRGGVFK KAHELSTLCG AEIAIIVFSP AGKPFSFTHP  60
HNIIDRYLSG NSHPTPLVTA HREAKIRELN REYTKHLAGV HELEQLSDAI DNLKSKVADR  120
ADELLLT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24840.13e-31M-type_MADS family protein