PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026420635.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family LBD
Protein Properties Length: 193aa    MW: 22456.5 Da    PI: 11.1095
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026420635.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26085.19.8e-2741137299
          DUF260   2 CaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelal 96 
                     CaaCk++r+kC++  +lapyfp ++ ++f nv+++FG++n l+ll+++++ + ++a+++l+ eA++r + P  G +gvi +l +ql+ + ae +l
  XP_026420635.1  41 CAACKHQRKKCPPTFPLAPYFPRDKLSDFLNVREVFGVRNFLRLLEKANPRQ-HEAARTLIREADVRNKYPAVGMCGVIERLYRQLKGVTAERDL 134
                     ***********************************************77765.6789**********************************9998 PP

          DUF260  97 lke 99 
                     l+e
  XP_026420635.1 135 LRE 137
                     775 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MVMENLHPDI TAQILSRVPQ KSVSSCKRRK RFKFTRSRQG CAACKHQRKK CPPTFPLAPY  60
FPRDKLSDFL NVREVFGVRN FLRLLEKANP RQHEAARTLI READVRNKYP AVGMCGVIER  120
LYRQLKGVTA ERDLLREREI LIARESTLED LNIKFVAEKL VFPGELIRTF ATVVLAFVPI  180
GLLRSLYIRK TFR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13850.19e-20LBD family protein