PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026420866.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GRAS
Protein Properties Length: 542aa    MW: 60382.6 Da    PI: 5.2003
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026420866.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS373.33e-1141705411374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvs.elykalppsetsekn.sseelaalklfsevsPilkf 93 
                     lv+lL++cAeav+ +d   a+alL++l+++a   g+++qR+ ++f+++La rl+  ++ + + ++++s++++ +  + +  al+l +e++P ++f
  XP_026420866.1 170 LVQLLFSCAEAVACRDRCHASALLSELRNNAKIFGTSFQRVSSCFVQGLADRLSLVQPlGAVGIVTTSDSTSAKsLDMKQEALSLVYEICPHIQF 264
                     689**************************************************99444144455555555544446667778888********** PP

            GRAS  94 shltaNqaIleavegeervHiiDfdi....sqGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlva 183
                     +h++aN  Ilea+ege+ vH++D+++    ++GlQW  L+++La+R+++pp  +RiTgvg+    s+  l+++ge L+ +A++lg++fef++ v+
  XP_026420866.1 265 GHFVANLSILEALEGESFVHVVDLGMtlglQYGLQWHGLIDSLANRAGEPPrGIRITGVGN----STMHLRSIGEELEVYARSLGLNFEFSL-VE 354
                     ***********************976222268899************777768********....99************************9.8* PP

            GRAS 184 krledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpre 278
                     ++le+l+ e++++ +gE+++Vn++lqlh +++es    +   +vL+++ +l Pkv+v+veq+++hn++ Fl rf+eal+yysa+fdsl++ lp+ 
  XP_026420866.1 355 SNLENLKKEDFNLYEGEVVVVNSILQLHCVVKESRGALN---SVLQVIHELCPKVLVLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDTMLPKY 446
                     *******************************88877777...8**************************************************** PP

            GRAS 279 seerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSa 372
                     + +r+k+E++++++ei+n+v+ceg +r+erhe++ +Wr+r+++aGF+p+p++  + +qak  l+k +  +gy++ ee+g+lvlgWk++p+v++S+
  XP_026420866.1 447 HTKRAKIEQFYFAEEIKNIVSCEGPARVERHEKVDQWRRRMSRAGFQPAPIK--IISQAKQWLEKLNvCEGYTIVEEKGCLVLGWKSKPIVAASC 539
                     **************************************************95..89*************************************** PP

            GRAS 373 Wr 374
                     W+
  XP_026420866.1 540 WK 541
                     *8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 542 aa     Download sequence    
MKFSKSMTPT SDLCLPHEFF DDDDEDEEES VMECKEEKVS NILDMSHSAM ASYPISAYLS  60
ILDNSSNCLF SSSASASPKM SHKRLRKTPN SEESIGSNDT PLSNSSNGSI NHGDSSASLI  120
SLPRLQFRDH ISTYKERFFA AEAMEEAATA MIGTDVEYRD EEVNEDGIKL VQLLFSCAEA  180
VACRDRCHAS ALLSELRNNA KIFGTSFQRV SSCFVQGLAD RLSLVQPLGA VGIVTTSDST  240
SAKSLDMKQE ALSLVYEICP HIQFGHFVAN LSILEALEGE SFVHVVDLGM TLGLQYGLQW  300
HGLIDSLANR AGEPPRGIRI TGVGNSTMHL RSIGEELEVY ARSLGLNFEF SLVESNLENL  360
KKEDFNLYEG EVVVVNSILQ LHCVVKESRG ALNSVLQVIH ELCPKVLVLV EQDSSHNGPF  420
FLGRFMEALH YYSAIFDSLD TMLPKYHTKR AKIEQFYFAE EIKNIVSCEG PARVERHEKV  480
DQWRRRMSRA GFQPAPIKII SQAKQWLEKL NVCEGYTIVE EKGCLVLGWK SKPIVAASCW  540
KC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.11e-80GRAS family protein