PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026420939.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

DBB

Protein Properties

Length: 259aa MW: 28564.1 Da PI: 4.6762

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026420939.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	19.4	2.3e-06	4	43	5	38
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 C+ +e+ +++ C ++ lC +C +e H H+ XP_026420939.1 4 QCDVCENAPATVICCADEAALCSKCDVEVHAAnklaskHQ 43 7*****************************6566666665 PP
2	zf-B_box	27.5	6.5e-09	53	94	2	37
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 + +kC+ +++k + +fC +++ l+C+dC + +H+ H XP_026420939.1 53 KLPKCDICQDKTAFIFCVEDRALFCKDCDEPIHSAgsissnH 94 789******************************655666666 PP

Sequence ? help Back to Top
Protein Sequence Length: 259 aa Download sequence
MKIQCDVCEN APATVICCAD EAALCSKCDV EVHAANKLAS KHQRLHLDAL SNKLPKCDIC 60 QDKTAFIFCV EDRALFCKDC DEPIHSAGSI SSNHQRFLAT GIRVALASSC AKETEKQIPE 120 PPSNQKLQPA CATKHTVQSL QTVPQQPSNY ANSPTWAVDD LLQFSDFESS DKLQKDSSID 180 FGELDWFTDI GMYNNQVNQE ASMAAAEVPQ LSISSMQPSN NTAATYKSIM KSNYYMPANK 240 KPRIEISDDE ENFMVPDLG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06040.1	5e-97	DBB family protein