PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026420944.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

HB-other

Protein Properties

Length: 1828aa MW: 203603 Da PI: 5.0777

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026420944.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	56	6.9e-18	31	87	1	57
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 ++kR t+ qle Le+ ++ + yps++ r+eL++kl+L++rq ++WF+ rR k++k XP_026420944.1 31 KSKRKMKTPMQLELLEKTYAVEAYPSEAIRQELSAKLDLSDRQLQMWFCHRRLKDRK 87 679****************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1828 aa Download sequence
MMMDSTPDGE RKKPPEGTSG GGGGGGGGES KSKRKMKTPM QLELLEKTYA VEAYPSEAIR 60 QELSAKLDLS DRQLQMWFCH RRLKDRKVAP EKKPRKDNMQ LTASTSGQGL DEMMMGGGDQ 120 GNDPGSGSGS GSSQYEHRKV GGSGGRTTIS RGVADTTVAM SRRYRETPQD ISELRAIAFV 180 ESQLGEALRE DGPILGMEFD PLPPGAFGAP IVAQQKQAGR PYDGKMYDRH DTKSIKTPSV 240 LPGSSGGKRK LASGNAHMVH PQSAPRALQE YQFLPEQPSV RSDTYERADP SHFYSSQHDG 300 HSGRASSLSA GGSHLHGKEQ VPTGYGQGTS ASLQSQQGRI SHVLGEYDRM DVQVGLENPL 360 LLCDRRMSNE DEAARLERKR KFAQSDEARI AREVEAHEKR IRKELEKQDI LRRKREEQMR 420 REMEKHDRER RKEEERLMRE KLREEERFQR EQKRELERRE RFMQKENLRA EKMRQKEEQR 480 REKEAARQKA ANERATARRI AKESMELIED ERLELMELAA SSKGLPSIIS LDSDTLENLD 540 LFKDMLVTFP PKSVQLSRPF AIQPWKDSEE NVGNLLMVWR FLITFADILE LWPFTLDEFV 600 QAFHDYDPRL LGEIHVALLR SIVKDIEDVA RTPSMGLGAN QNSSVNPGGG HPQIVEGAYA 660 WGFDIRSWQQ HLNPLTWPEV LRQFALSAGF GPQLKKRSLE QSFFRDENEG HDCEDIVSTL 720 RNGAAAVSAA AVMQEKGLSQ PRRSRHRLTP GTVKFAAFHV LSLEGSKGLS ILEVADKIQK 780 SGLRDLTTSK TPEASIAAAL SRDSHLFERT APSTYCVREA FRKDPNDADA ILSAAREKIQ 840 IFANGLSDSE EAGKDVEDAD DDSECDVAED PEVDDVDMTS NQKEDHHLAS VITDKSVACL 900 KVGKRENAGK EVGEILQSGH GSAPGSSLKS FPVEGSQEIG TGALTDQSAD LARNSNGAST 960 NDLEDAEIDE SNTGEPWVQG LMEGEYADLT VEERLNALVA LIGVAIEGNS VRVILEVRLE 1020 AANALKKQMW AEAQLDKRRM KEEYITKPQS LSFMGKTELN VLSFVVDGSQ SPFGDSKNNE 1080 ASLHPSLKEE PIFDPSNAQI YLNNMSAECN VTPENYQQQH AYAAAEKSRS QYKSYIGQRA 1140 EEMYVYRSLP LGQDRKRNRY WQFVTSATRN DPGTGRIFYE SQGGCWRLID TEEAFDILLS 1200 SLDIRGIRES HLHSMLQKIE VSFKDAVKRN SKCRNHVDPV EDRVKTEVSE IVSSPDRSAG 1260 TESPSSTVCA VGSDTVLQSS SFKIDLGRNE TEKTDALKRY QDSQRWMWKE CFNPSTMCAI 1320 KYGKKRCSEL LVTCDFCLDS YFPKDNRCPV CHRIFGNLSN SSKSSDSVNQ CEEKPRLESD 1380 WNIRGLETSL PLRIRLLKAQ VAITEVSIPP EAIQPLWTED SRNSWGLKLQ SSSSAEDLLQ 1440 ILTLLEGAIK RDCLSSSFET TKELLGNFPP PVRAADGFSS GSVPILPWVP QTTAAVALRL 1500 LELDAAITYM LQQKAESQKD KESGDFIKLP SKYTVIKNIQ EAEPAVTPEP AVFLQEENWF 1560 DMGSGRSTSG RGQMIRGKGR GRSAGGRLPR GSSGMRIDSG RVSAGKGEKM VAVQGLGGKS 1620 QTARGKGGRK RGKRTAKSRQ KSSAAVKKRV VIKDMGMGGF GGQFGNSIVI PKQNNYRESP 1680 RSSGGEDEGG WEEDTRRLHD VHVQMDRDDI SVEEASGESD DNGLGEYDVR RTDYSGMYNG 1740 KSVNLLESDA EDEDEYVDDS RIGDEEDEED LEEVEGDGYG EDDVGMEERY RLHGVGTNRN 1800 VEEIEEDDEE ENVDADEAME TDSSDYSE

Sequence ? help Back to Top

Protein Sequence Length: 1828 aa Download sequence

MMMDSTPDGE RKKPPEGTSG GGGGGGGGES KSKRKMKTPM QLELLEKTYA VEAYPSEAIR  60
QELSAKLDLS DRQLQMWFCH RRLKDRKVAP EKKPRKDNMQ LTASTSGQGL DEMMMGGGDQ  120
GNDPGSGSGS GSSQYEHRKV GGSGGRTTIS RGVADTTVAM SRRYRETPQD ISELRAIAFV  180
ESQLGEALRE DGPILGMEFD PLPPGAFGAP IVAQQKQAGR PYDGKMYDRH DTKSIKTPSV  240
LPGSSGGKRK LASGNAHMVH PQSAPRALQE YQFLPEQPSV RSDTYERADP SHFYSSQHDG  300
HSGRASSLSA GGSHLHGKEQ VPTGYGQGTS ASLQSQQGRI SHVLGEYDRM DVQVGLENPL  360
LLCDRRMSNE DEAARLERKR KFAQSDEARI AREVEAHEKR IRKELEKQDI LRRKREEQMR  420
REMEKHDRER RKEEERLMRE KLREEERFQR EQKRELERRE RFMQKENLRA EKMRQKEEQR  480
REKEAARQKA ANERATARRI AKESMELIED ERLELMELAA SSKGLPSIIS LDSDTLENLD  540
LFKDMLVTFP PKSVQLSRPF AIQPWKDSEE NVGNLLMVWR FLITFADILE LWPFTLDEFV  600
QAFHDYDPRL LGEIHVALLR SIVKDIEDVA RTPSMGLGAN QNSSVNPGGG HPQIVEGAYA  660
WGFDIRSWQQ HLNPLTWPEV LRQFALSAGF GPQLKKRSLE QSFFRDENEG HDCEDIVSTL  720
RNGAAAVSAA AVMQEKGLSQ PRRSRHRLTP GTVKFAAFHV LSLEGSKGLS ILEVADKIQK  780
SGLRDLTTSK TPEASIAAAL SRDSHLFERT APSTYCVREA FRKDPNDADA ILSAAREKIQ  840
IFANGLSDSE EAGKDVEDAD DDSECDVAED PEVDDVDMTS NQKEDHHLAS VITDKSVACL  900
KVGKRENAGK EVGEILQSGH GSAPGSSLKS FPVEGSQEIG TGALTDQSAD LARNSNGAST  960
NDLEDAEIDE SNTGEPWVQG LMEGEYADLT VEERLNALVA LIGVAIEGNS VRVILEVRLE  1020
AANALKKQMW AEAQLDKRRM KEEYITKPQS LSFMGKTELN VLSFVVDGSQ SPFGDSKNNE  1080
ASLHPSLKEE PIFDPSNAQI YLNNMSAECN VTPENYQQQH AYAAAEKSRS QYKSYIGQRA  1140
EEMYVYRSLP LGQDRKRNRY WQFVTSATRN DPGTGRIFYE SQGGCWRLID TEEAFDILLS  1200
SLDIRGIRES HLHSMLQKIE VSFKDAVKRN SKCRNHVDPV EDRVKTEVSE IVSSPDRSAG  1260
TESPSSTVCA VGSDTVLQSS SFKIDLGRNE TEKTDALKRY QDSQRWMWKE CFNPSTMCAI  1320
KYGKKRCSEL LVTCDFCLDS YFPKDNRCPV CHRIFGNLSN SSKSSDSVNQ CEEKPRLESD  1380
WNIRGLETSL PLRIRLLKAQ VAITEVSIPP EAIQPLWTED SRNSWGLKLQ SSSSAEDLLQ  1440
ILTLLEGAIK RDCLSSSFET TKELLGNFPP PVRAADGFSS GSVPILPWVP QTTAAVALRL  1500
LELDAAITYM LQQKAESQKD KESGDFIKLP SKYTVIKNIQ EAEPAVTPEP AVFLQEENWF  1560
DMGSGRSTSG RGQMIRGKGR GRSAGGRLPR GSSGMRIDSG RVSAGKGEKM VAVQGLGGKS  1620
QTARGKGGRK RGKRTAKSRQ KSSAAVKKRV VIKDMGMGGF GGQFGNSIVI PKQNNYRESP  1680
RSSGGEDEGG WEEDTRRLHD VHVQMDRDDI SVEEASGESD DNGLGEYDVR RTDYSGMYNG  1740
KSVNLLESDA EDEDEYVDDS RIGDEEDEED LEEVEGDGYG EDDVGMEERY RLHGVGTNRN  1800
VEEIEEDDEE ENVDADEAME TDSSDYSE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	11	37	RKKPPEGTSGGGGGGGGGESKSKRKMK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44180.1	0.0	HB-other family protein