PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026420945.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

HB-other

Protein Properties

Length: 1825aa MW: 203256 Da PI: 5.0777

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026420945.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	56	6.9e-18	31	87	1	57
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 ++kR t+ qle Le+ ++ + yps++ r+eL++kl+L++rq ++WF+ rR k++k XP_026420945.1 31 KSKRKMKTPMQLELLEKTYAVEAYPSEAIRQELSAKLDLSDRQLQMWFCHRRLKDRK 87 679****************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1825 aa Download sequence
MMMDSTPDGE RKKPPEGTSG GGGGGGGGES KSKRKMKTPM QLELLEKTYA VEAYPSEAIR 60 QELSAKLDLS DRQLQMWFCH RRLKDRKVAP EKKPRKDNMQ LTASTSGQGL DEMMMGGGDQ 120 GNDPGSGSGS GSSQYEHRKV GGSGGRTTIS RGVADTTVAM SRRYRETPQD ISELRAIAFV 180 ESQLGEALRE DGPILGMEFD PLPPGAFGAP IVAQQKQAGR PYDGKMYDRH DTKSIKTPSV 240 LPGSSGGKRK LASGNAHMVH PQSAPRALQE YQFLPEQPSV RSDTYERADP SHFYSSQHDG 300 HSGRASSLSA GGSHLHGKEQ VPTGYGQGTS ASLQSQQGRI SHVLGEYDRM DVQVGLENPL 360 LLCDRRMSNE DEAARLERKR KSDEARIARE VEAHEKRIRK ELEKQDILRR KREEQMRREM 420 EKHDRERRKE EERLMREKLR EEERFQREQK RELERRERFM QKENLRAEKM RQKEEQRREK 480 EAARQKAANE RATARRIAKE SMELIEDERL ELMELAASSK GLPSIISLDS DTLENLDLFK 540 DMLVTFPPKS VQLSRPFAIQ PWKDSEENVG NLLMVWRFLI TFADILELWP FTLDEFVQAF 600 HDYDPRLLGE IHVALLRSIV KDIEDVARTP SMGLGANQNS SVNPGGGHPQ IVEGAYAWGF 660 DIRSWQQHLN PLTWPEVLRQ FALSAGFGPQ LKKRSLEQSF FRDENEGHDC EDIVSTLRNG 720 AAAVSAAAVM QEKGLSQPRR SRHRLTPGTV KFAAFHVLSL EGSKGLSILE VADKIQKSGL 780 RDLTTSKTPE ASIAAALSRD SHLFERTAPS TYCVREAFRK DPNDADAILS AAREKIQIFA 840 NGLSDSEEAG KDVEDADDDS ECDVAEDPEV DDVDMTSNQK EDHHLASVIT DKSVACLKVG 900 KRENAGKEVG EILQSGHGSA PGSSLKSFPV EGSQEIGTGA LTDQSADLAR NSNGASTNDL 960 EDAEIDESNT GEPWVQGLME GEYADLTVEE RLNALVALIG VAIEGNSVRV ILEVRLEAAN 1020 ALKKQMWAEA QLDKRRMKEE YITKPQSLSF MGKTELNVLS FVVDGSQSPF GDSKNNEASL 1080 HPSLKEEPIF DPSNAQIYLN NMSAECNVTP ENYQQQHAYA AAEKSRSQYK SYIGQRAEEM 1140 YVYRSLPLGQ DRKRNRYWQF VTSATRNDPG TGRIFYESQG GCWRLIDTEE AFDILLSSLD 1200 IRGIRESHLH SMLQKIEVSF KDAVKRNSKC RNHVDPVEDR VKTEVSEIVS SPDRSAGTES 1260 PSSTVCAVGS DTVLQSSSFK IDLGRNETEK TDALKRYQDS QRWMWKECFN PSTMCAIKYG 1320 KKRCSELLVT CDFCLDSYFP KDNRCPVCHR IFGNLSNSSK SSDSVNQCEE KPRLESDWNI 1380 RGLETSLPLR IRLLKAQVAI TEVSIPPEAI QPLWTEDSRN SWGLKLQSSS SAEDLLQILT 1440 LLEGAIKRDC LSSSFETTKE LLGNFPPPVR AADGFSSGSV PILPWVPQTT AAVALRLLEL 1500 DAAITYMLQQ KAESQKDKES GDFIKLPSKY TVIKNIQEAE PAVTPEPAVF LQEENWFDMG 1560 SGRSTSGRGQ MIRGKGRGRS AGGRLPRGSS GMRIDSGRVS AGKGEKMVAV QGLGGKSQTA 1620 RGKGGRKRGK RTAKSRQKSS AAVKKRVVIK DMGMGGFGGQ FGNSIVIPKQ NNYRESPRSS 1680 GGEDEGGWEE DTRRLHDVHV QMDRDDISVE EASGESDDNG LGEYDVRRTD YSGMYNGKSV 1740 NLLESDAEDE DEYVDDSRIG DEEDEEDLEE VEGDGYGEDD VGMEERYRLH GVGTNRNVEE 1800 IEEDDEEENV DADEAMETDS SDYSE

Sequence ? help Back to Top

Protein Sequence Length: 1825 aa Download sequence

MMMDSTPDGE RKKPPEGTSG GGGGGGGGES KSKRKMKTPM QLELLEKTYA VEAYPSEAIR  60
QELSAKLDLS DRQLQMWFCH RRLKDRKVAP EKKPRKDNMQ LTASTSGQGL DEMMMGGGDQ  120
GNDPGSGSGS GSSQYEHRKV GGSGGRTTIS RGVADTTVAM SRRYRETPQD ISELRAIAFV  180
ESQLGEALRE DGPILGMEFD PLPPGAFGAP IVAQQKQAGR PYDGKMYDRH DTKSIKTPSV  240
LPGSSGGKRK LASGNAHMVH PQSAPRALQE YQFLPEQPSV RSDTYERADP SHFYSSQHDG  300
HSGRASSLSA GGSHLHGKEQ VPTGYGQGTS ASLQSQQGRI SHVLGEYDRM DVQVGLENPL  360
LLCDRRMSNE DEAARLERKR KSDEARIARE VEAHEKRIRK ELEKQDILRR KREEQMRREM  420
EKHDRERRKE EERLMREKLR EEERFQREQK RELERRERFM QKENLRAEKM RQKEEQRREK  480
EAARQKAANE RATARRIAKE SMELIEDERL ELMELAASSK GLPSIISLDS DTLENLDLFK  540
DMLVTFPPKS VQLSRPFAIQ PWKDSEENVG NLLMVWRFLI TFADILELWP FTLDEFVQAF  600
HDYDPRLLGE IHVALLRSIV KDIEDVARTP SMGLGANQNS SVNPGGGHPQ IVEGAYAWGF  660
DIRSWQQHLN PLTWPEVLRQ FALSAGFGPQ LKKRSLEQSF FRDENEGHDC EDIVSTLRNG  720
AAAVSAAAVM QEKGLSQPRR SRHRLTPGTV KFAAFHVLSL EGSKGLSILE VADKIQKSGL  780
RDLTTSKTPE ASIAAALSRD SHLFERTAPS TYCVREAFRK DPNDADAILS AAREKIQIFA  840
NGLSDSEEAG KDVEDADDDS ECDVAEDPEV DDVDMTSNQK EDHHLASVIT DKSVACLKVG  900
KRENAGKEVG EILQSGHGSA PGSSLKSFPV EGSQEIGTGA LTDQSADLAR NSNGASTNDL  960
EDAEIDESNT GEPWVQGLME GEYADLTVEE RLNALVALIG VAIEGNSVRV ILEVRLEAAN  1020
ALKKQMWAEA QLDKRRMKEE YITKPQSLSF MGKTELNVLS FVVDGSQSPF GDSKNNEASL  1080
HPSLKEEPIF DPSNAQIYLN NMSAECNVTP ENYQQQHAYA AAEKSRSQYK SYIGQRAEEM  1140
YVYRSLPLGQ DRKRNRYWQF VTSATRNDPG TGRIFYESQG GCWRLIDTEE AFDILLSSLD  1200
IRGIRESHLH SMLQKIEVSF KDAVKRNSKC RNHVDPVEDR VKTEVSEIVS SPDRSAGTES  1260
PSSTVCAVGS DTVLQSSSFK IDLGRNETEK TDALKRYQDS QRWMWKECFN PSTMCAIKYG  1320
KKRCSELLVT CDFCLDSYFP KDNRCPVCHR IFGNLSNSSK SSDSVNQCEE KPRLESDWNI  1380
RGLETSLPLR IRLLKAQVAI TEVSIPPEAI QPLWTEDSRN SWGLKLQSSS SAEDLLQILT  1440
LLEGAIKRDC LSSSFETTKE LLGNFPPPVR AADGFSSGSV PILPWVPQTT AAVALRLLEL  1500
DAAITYMLQQ KAESQKDKES GDFIKLPSKY TVIKNIQEAE PAVTPEPAVF LQEENWFDMG  1560
SGRSTSGRGQ MIRGKGRGRS AGGRLPRGSS GMRIDSGRVS AGKGEKMVAV QGLGGKSQTA  1620
RGKGGRKRGK RTAKSRQKSS AAVKKRVVIK DMGMGGFGGQ FGNSIVIPKQ NNYRESPRSS  1680
GGEDEGGWEE DTRRLHDVHV QMDRDDISVE EASGESDDNG LGEYDVRRTD YSGMYNGKSV  1740
NLLESDAEDE DEYVDDSRIG DEEDEEDLEE VEGDGYGEDD VGMEERYRLH GVGTNRNVEE  1800
IEEDDEEENV DADEAMETDS SDYSE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	11	37	RKKPPEGTSGGGGGGGGGESKSKRKMK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44180.1	0.0	HB-other family protein