PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026421053.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 244aa MW: 28257.5 Da PI: 7.9638

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026421053.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	61.3	2e-19	25	72	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd+ll+++v ++G g+W+++a+ g++R +k+c++rw +yl XP_026421053.1 25 RGPWTAEEDKLLIEYVSLHGEGRWNSVAKFAGLRRNGKSCRLRWVNYL 72 89********************************************97 PP
2	Myb_DNA-binding	55.3	1.5e-17	78	122	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr T++E+ +++++++++G++ W+tIa+ ++ gRt++++k++w+++ XP_026421053.1 78 RGRITPQEENIIIELHARWGNR-WSTIAQSLP-GRTDNEIKNYWRTH 122 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 244 aa Download sequence
MDEENLMMSS WGTTGICNQE EEWRRGPWTA EEDKLLIEYV SLHGEGRWNS VAKFAGLRRN 60 GKSCRLRWVN YLRPDLKRGR ITPQEENIII ELHARWGNRW STIAQSLPGR TDNEIKNYWR 120 THFKTKGKKS SENPEKSKKR LLRKQQFQYE QQQLQQKNHM DLKRIMSVLE DNDNTVSCNL 180 ATYPNYNNIN NFADQYVLSD NSSANAVQVD VPGGSTGDNT WSGLWNLDDL HASLDALCAS 240 STPY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24310.1	7e-70	MYB family protein