PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026421250.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 223aa MW: 25865.1 Da PI: 9.9307

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026421250.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	71.2	2.3e-22	50	143	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 ++Y+eY++++GFsvrk++s+ + r it+ fvC +eg e+ + + k++r++++ +tgCka++++ + ++ w+++++ ++HnH+l XP_026421250.1 50 NYYKEYGNRLGFSVRKRSSYATARGPLITRVIFVCDCEGIYVEKPPRnevELKKKRNTSTMKTGCKAMIRIAFDIkHKMWYINEFIEKHNHPLI 143 69***********************************8766554445567888999999*******98779*************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 223 aa Download sequence
MFVAFLIVSY DILKRQMTDM EEDTGLPTNG KDLSKPAIYM RFSSIEEAEN YYKEYGNRLG 60 FSVRKRSSYA TARGPLITRV IFVCDCEGIY VEKPPRNEVE LKKKRNTSTM KTGCKAMIRI 120 AFDIKHKMWY INEFIEKHNH PLISPNKRHL MRSNKYMPPA ARCLAEQFNK QRLPVGKVAS 180 LFGNGENIGF TPRDVYNHLR TVRESLIEVQ TIITNLLHLA LHC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	8e-17	FAR1 family protein