PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026421520.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family M-type_MADS
Protein Properties Length: 359aa    MW: 40566.1 Da    PI: 7.4999
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026421520.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF73.32e-23953145
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                    kr en+s rqvt+skRr+gilKKA ELS+LCd+++a+++fs+tgk
  XP_026421520.1  9 KRLENTSGRQVTYSKRRAGILKKARELSILCDIDIALLMFSPTGK 53
                    789****************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    
MGRVKLKIKR LENTSGRQVT YSKRRAGILK KARELSILCD IDIALLMFSP TGKPTLCLGE  60
RSNIEEVIAK FAQLTPQERA KRKLESLEAL KKTFKKLDHD VNIQEFLGTS TQTVEELTNQ  120
SRLLQAQLSE MRKRLSCWRD PNKINNIEDL TIMENSVKES LARVTLHKEN FGKQPLMLLD  180
CDQFPNGMNL PLVMGGDQQA QPPIWLPNND GQEMMLRENP NVLAQRNIEC STDPSIHNYN  240
GYHLGTGKQP EMDSACQEGS TLHELNRNAC LSLQLGGQMP SFASYSLNLL NNKSFKADEK  300
MTLQEPPMDY QVSSSNSFDP PSHRYDTYES GWASSSGHCA VPMFDGTLYH PHPRAQQPN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03060.25e-96M-type_MADS family protein