PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026421811.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MYB_related
Protein Properties Length: 277aa    MW: 30854.2 Da    PI: 9.492
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026421811.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.92.1e-12555146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46
                     +++WT+eE+e l+ +++++G+g Wk I +          R+  ++k++w++
   XP_026421811.1  5 KQKWTAEEEEALIAGINKHGTGKWKNIQKDPEyghilAARSNIDLKDKWRN 55
                     79*****************************999***99**********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MGAPKQKWTA EEEEALIAGI NKHGTGKWKN IQKDPEYGHI LAARSNIDLK DKWRNMSVAT  60
GEGSRPKGVK AAAATPKVPK LTPSAIFQSP SSSQTAEDAK DKVLDPTKNA LDVKPPPRYD  120
LMILEALSNI KDPNGADIGA INDFIEQRHE VPSNFRRLLS SKLRRLAALD KLEKVQHYYK  180
IKKDAPLGIT MEQTPKPNDS RTKQSQDSNF PSSTFKESTM FTAQKIAEAE NKSFVASEAV  240
KEAERVEKMA EHSACMKLFF EDILEQCKRG EPVIMAF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17520.18e-58MYB_related family protein