PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026421879.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

HB-other

Protein Properties

Length: 1127aa MW: 125869 Da PI: 7.1052

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026421879.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	19.7	1.5e-06	74	130	1	57
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +++R ++++ ++ ++++F + ++s++e +e+++ +g+t +qV+ +F +R + +k XP_026421879.1 74 KKPRDLLNPKAVKYMQSVFSIKDTISKKESREISALCGVTLTQVREYFASQRSRVRK 130 799**************************************************9997 PP

Sequence ? help Back to Top
Protein Sequence Length: 1127 aa Download sequence
MELSTEVSTT TTLMEVDIGN STESLQRFLE LQKDLFHSQI DQLQNIVITQ CKLTGANPLS 60 QEMAAGALSI NIGKKPRDLL NPKAVKYMQS VFSIKDTISK KESREISALC GVTLTQVREY 120 FASQRSRVRK FVRLAREKAI KTDVPKTLQD GCSTGSDPSA PLIDQAPLNS ISDQATLNCT 180 DDQAPLDTVN DQAPSDPIAD QSLLNPVIDP APLNIIINQA PLNTIIDQAQ LDSVIDRAPL 240 NTMDPMVIQE GPSSSLQEEN FPGIDASDKN FVENIFDMMR KEETFSGQVK LMEWIMRIQN 300 ASVLYRFLTK GGLMILAAWL SDAAIEEQTT VLLVILKVLC HLPLQKALPL QMSAVLQTVN 360 RLRFYRTSDI SNRAKVLLTR WSKLFVRSHT LNKPSHTDSR SNMQRGISKK QRTSEMINNE 420 MQSNVDIPED IIAFSLEGSE NCRKQEPPQT LKLLAAPGDD TNKRNMRGAS FQSRERRKVL 480 LVEQPGRNTT DRSLHVARPV NPNQGRPMSA DDIQKAKMRA MFMRSKYGKS GSSPKENQQP 540 KTEGPSRASV SQPGHLLTPS ISSPVRPKIE EIRKSLVPSS ENSPVKPQIE EMKESVILPS 600 ENSPVRPQIE EMRETVVFSS VTSPVRPHIE EMGKPIVLSS KTSPVRLQPE EMRESVLLPS 660 GTSPVRPEIE DIRKPLVFSS ETTTTLLETS IRSKPSLSPQ NRPSLDKLKR DRISWQMPPE 720 IKINSLWRVG VGENSKEIEI QSNRIRRERE TIYQRIQDIP SDPKKPWDQE MDYDDTLTPE 780 IPTEQPLDVD TAENNSSYHQ ETVTGPSTSY SVPVNTGSVA AEPEPDLELL AVLLKNPDLV 840 FALTSGQGGN ISSEETVKLL DMIKKNGLGQ TTGVSNGFVG GNHPTNMDMT SLPSPTPPSE 900 IRMNRWRSEV AKDPITLAAA HTISVSDQRH PTGLRQPENS ILDYHMQQAQ SNQHHQPVLN 960 PEYFATGLIQ QSSPPSSFPN QQAQLRTNPY INQVQQQSTI SSLQQSILAT ALPLLQPEAA 1020 YNYGQVHNHS TKPATVPSLQ EPAAQMSWQW NEVSRPSWER NEYVREQDIR YSSPDSNMDY 1080 GNGWDSTGIS GGGAGRGRNS RSSNLSRRRD FDRRDLPRNG GSRTWRR

Sequence ? help Back to Top

Protein Sequence Length: 1127 aa Download sequence

MELSTEVSTT TTLMEVDIGN STESLQRFLE LQKDLFHSQI DQLQNIVITQ CKLTGANPLS  60
QEMAAGALSI NIGKKPRDLL NPKAVKYMQS VFSIKDTISK KESREISALC GVTLTQVREY  120
FASQRSRVRK FVRLAREKAI KTDVPKTLQD GCSTGSDPSA PLIDQAPLNS ISDQATLNCT  180
DDQAPLDTVN DQAPSDPIAD QSLLNPVIDP APLNIIINQA PLNTIIDQAQ LDSVIDRAPL  240
NTMDPMVIQE GPSSSLQEEN FPGIDASDKN FVENIFDMMR KEETFSGQVK LMEWIMRIQN  300
ASVLYRFLTK GGLMILAAWL SDAAIEEQTT VLLVILKVLC HLPLQKALPL QMSAVLQTVN  360
RLRFYRTSDI SNRAKVLLTR WSKLFVRSHT LNKPSHTDSR SNMQRGISKK QRTSEMINNE  420
MQSNVDIPED IIAFSLEGSE NCRKQEPPQT LKLLAAPGDD TNKRNMRGAS FQSRERRKVL  480
LVEQPGRNTT DRSLHVARPV NPNQGRPMSA DDIQKAKMRA MFMRSKYGKS GSSPKENQQP  540
KTEGPSRASV SQPGHLLTPS ISSPVRPKIE EIRKSLVPSS ENSPVKPQIE EMKESVILPS  600
ENSPVRPQIE EMRETVVFSS VTSPVRPHIE EMGKPIVLSS KTSPVRLQPE EMRESVLLPS  660
GTSPVRPEIE DIRKPLVFSS ETTTTLLETS IRSKPSLSPQ NRPSLDKLKR DRISWQMPPE  720
IKINSLWRVG VGENSKEIEI QSNRIRRERE TIYQRIQDIP SDPKKPWDQE MDYDDTLTPE  780
IPTEQPLDVD TAENNSSYHQ ETVTGPSTSY SVPVNTGSVA AEPEPDLELL AVLLKNPDLV  840
FALTSGQGGN ISSEETVKLL DMIKKNGLGQ TTGVSNGFVG GNHPTNMDMT SLPSPTPPSE  900
IRMNRWRSEV AKDPITLAAA HTISVSDQRH PTGLRQPENS ILDYHMQQAQ SNQHHQPVLN  960
PEYFATGLIQ QSSPPSSFPN QQAQLRTNPY INQVQQQSTI SSLQQSILAT ALPLLQPEAA  1020
YNYGQVHNHS TKPATVPSLQ EPAAQMSWQW NEVSRPSWER NEYVREQDIR YSSPDSNMDY  1080
GNGWDSTGIS GGGAGRGRNS RSSNLSRRRD FDRRDLPRNG GSRTWRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02560.2	1e-136	HB-other family protein